Alistipes finegoldii: Alfi_2009
Help
Entry
Alfi_2009 CDS
T02133
Name
(GenBank) SSU ribosomal protein S12P methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
afd
Alistipes finegoldii
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afd03009
]
Alfi_2009
Enzymes [BR:
afd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Alfi_2009
Ribosome biogenesis [BR:
afd03009
]
Prokaryotic type
ribosomal protein modification factors
Alfi_2009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
AFL78317
UniProt:
I3YMU9
LinkDB
All DBs
Position
complement(2260958..2262256)
Genome browser
AA seq
432 aa
AA seq
DB search
MKKINVITLGCSKNTVDSEHLMARLAAAGYAVLFDSDRTDAKVVVINTCGFIGDAKQESI
DMILRAAAAKNAGKIERLFVVGCLSERYADELRAELPEVDEFFGARTWDGIVRALGAVED
PALETERHLTTPKHYAYLKISEGCNWKCGYCAIPLIRGGHVSVPMERLEEEARKLAAGGV
KELIVIAQDTTYYGLDLYGRRMLAELLRRLCRIGGIEWIRLHYAYPTAFPDEVIEVMASE
PKICKYLDIPFQHISDAQLSAMQRRHTKADAYALIGRLREAIPDLALRTTLLVGYPGETQ
ADFAELEEFVRDVRFERLGVFAYSEEEGTYSAQKLQDNIPEEVKQQRVERIMALQNVISL
ENNLRRVGRTERVLIDSRQGDYYVGRTQYDSPEVDQEILIPASEKRLLRGRFYDVRIDSA
ADYDLYGRAAGK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcaacgtcataacgctgggctgttcgaaaaacaccgtggacagcgagcac
ctgatggcccggctcgccgcggcgggttacgcggtgctcttcgacagcgaccgcaccgac
gccaaggtcgtcgtgatcaacacctgcggattcatcggcgacgccaagcaggagtcgatc
gacatgatcctgcgggcggccgcggccaaaaacgccggcaagatcgaacggctgttcgtc
gtcggctgtctctcggaacgctacgccgacgagctgcgggccgaactgcccgaagtggac
gaattcttcggcgcccgcacgtgggacggcatcgtccgggcgctgggcgcggtcgaagac
ccggcgctggagaccgagcggcacctgaccacgccgaagcattacgcctacctgaaaatc
tccgagggctgcaactggaaatgcggctactgcgccattccgctcatccgcggaggacat
gtctccgtcccgatggagaggctcgaagaggaagcccgcaaactcgcggccggcggcgtg
aaggagctgatcgtgatcgcgcaggatacgacctactacggactcgacctctacggccgg
cggatgctggccgaactgcttcgccggctctgccgcatcggaggcatcgagtggatacgc
ctgcactacgcctatcccacggcattccccgacgaggtgatcgaagtcatggcctcggaa
cccaaaatctgcaagtacctcgacattccgttccagcacatctccgacgcccagctttcg
gccatgcagcggcgccacaccaaagccgacgcctatgcgctgatcggacgcctgcgcgaa
gccatccccgatctggcgctgcgcaccacgctcttggtcggctatcccggcgagacgcag
gccgatttcgccgagctggaagagttcgtgcgcgacgtacgcttcgagcggctgggggtc
ttcgcctattcggaggaggaaggcacctattcggcgcagaaattgcaggacaacattcct
gaagaggtcaaacagcagcgcgtcgaacggatcatggcgcttcagaacgtaatatcgctc
gaaaacaacctgcgccgcgtcggccggaccgagcgggtgctgatcgactcgcggcagggc
gattactacgtgggacgcacgcagtacgactcgcccgaagtggatcaggagatcctgatt
ccggcatcggaaaagcggcttctgcgcggtcgtttctacgacgttcgcatcgattccgcc
gccgactacgacctctacggccgggccgccgggaaataa
DBGET
integrated database retrieval system
