Alistipes finegoldii: Alfi_2414
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Entry
Alfi_2414 CDS
T02133
Name
(GenBank) RNA polymerase sigma-70 factor, Bacteroides expansion family 1
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
afd
Alistipes finegoldii
Pathway
afd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Alfi_2414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afd03021
]
Alfi_2414
Transcription machinery [BR:
afd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Alfi_2414
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
Sigma70_ECF
Sigma70_r4
HTH_38
HTH_10
HTH_40
HTH_23
PF0610-like_N
HTH_11
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AFL78687
LinkDB
All DBs
Position
2727789..2728352
Genome browser
AA seq
187 aa
AA seq
DB search
MPLDSEYELMQRLSAGNEDAFGELFGRYYPRVCAFVGCIVKEESTAEDIAQDIFLKIWER
RDIFQGRVASFNGYVYRMARNAALNAIRQMTNIDWEQYIQIEETLPDESFEKEYYSREKE
LFIRLVVCRMPEQRRRIFEMSRYAGMDNQAIADELKISKRTVENHLTLALKKLREALAVF
SLLFFMH
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgccgttggattccgaatacgaactgatgcaacgattgtccgcaggcaacgaggatgct
ttcggagagttgttcgggagatattatccccgtgtctgcgcgttcgtcggctgtatcgtc
aaggaggagagcactgcggaagacattgcgcaggacatttttctgaagatttgggaacgg
cgcgacatctttcaggggcgggtcgcttcgttcaacggatatgtttatcgcatggcgcgt
aacgccgctctcaatgcgattcgtcagatgaccaatattgattgggaacaatatattcag
atcgaggaaacgctgccggacgaatcgttcgaaaaggaatactattcccgtgaaaaagag
cttttcatccggcttgtcgtctgccggatgcccgaacaacgccgccggatattcgaaatg
agccgttatgcggggatggacaatcaggccattgccgacgaactcaagatatcgaaacga
acggtcgaaaaccacctgacgctcgcattgaaaaaactacgcgaggcattagccgttttc
tcgcttcttttctttatgcactga
DBGET
integrated database retrieval system
