Alistipes finegoldii: Alfi_2884
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Entry
Alfi_2884 CDS
T02133
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
afd
Alistipes finegoldii
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afd03032
]
Alfi_2884
03400 DNA repair and recombination proteins [BR:
afd03400
]
Alfi_2884
Enzymes [BR:
afd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Alfi_2884
DNA replication proteins [BR:
afd03032
]
Prokaryotic type
DNA Topoisomerases
Alfi_2884
DNA repair and recombination proteins [BR:
afd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Alfi_2884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SGL
Motif
Other DBs
NCBI-ProteinID:
AFL79134
UniProt:
I3YQ66
LinkDB
All DBs
Position
3261516..3264071
Genome browser
AA seq
851 aa
AA seq
DB search
MLTEEEKNAGLVGRIIPINIEEQMKSAYIDYSMSVIVSRALPDVRDGMKPVHRRILYDMS
AELNLYSDKPTRKSARIVGDVLGKFHPHGDTSVYDAMVRLAQDWSMRYPLVDGQGNFGSM
DGDSPAAMRYTEARMKKITDEVMADIDKETVDWTLNFDDTIPEPTVLPTKIPLLIVNGAS
GIAVGMATNMAPHNLSEVVDACCAYIDNPEITGEEMLQYIKGPDFPTGGIIYGYEGVREA
MLTGRGRVMMRAKTDIEHTPSGRECIVITEIPYMINKAEMIKKIADMINEKKIEGISYIN
DESDRNGLRIIIILKHDAVASVVLNTLFKNTPLQTSFAVNNIALVNGRPQMLPMRDLVKH
FVDHRHDVVVRRARFDLKKAEERLHIVQGLLIAQDNIDEIVHIIRSSQTPDAAKQTMIER
FNLSDIQASAIIEMRLRALTGLEYGKLIAERDELTKQIAYLKEVLENVGMQMQIIKDELL
EIKEKYGDERRSEIVYSSEEFNPEDFYADDDMVITISHMGYIKRTPLAEYRTQNRGGVGA
KGSATRDEDFIEHIYVASMHNTMLFFTEKGRCFWLKVYEIPEGARSSKGRAIQNVIQIEP
DDKVRAYINVKRLNDEEYVNNNFIIMCTKDGTIKKTKLEAYSRPRQNGVNAIVIREGDQL
IEAKLTSGQAEVMIAARDGKAIRFNESTVRPIGRVGAGVRGISIEESDEVVGMICVEPDS
KQDVLVLSENGYGKRTDLDEYRITNRGGKGVKTINVTEKTGKLISIQAVTDDNDLMIINR
SGLTIRTAVSQIRLAGRATQGVRIINLREGDAIASVMAVPAAGDEDEEVQSAEVAATGND
ATPEADRPAEE
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgctaactgaagaagaaaagaatgccggtttggtaggacgtatcattcctatcaatatc
gaagagcagatgaagtcggcgtacatcgactattcgatgtcggtcatcgtgtcgcgcgcg
cttcccgatgtgcgcgacggcatgaagcccgtacaccgccgcatcctctacgatatgagt
gcggagctcaacctctactccgataagcccacccgtaagtcggcccgtatcgtcggcgac
gtgctcggtaagttccacccccacggcgatacgtcggtctacgacgccatggtgcgtctg
gctcaggactggtcgatgcgttatccgctggtcgacggtcagggtaacttcggttctatg
gacggcgactcgcctgcggccatgcgttacaccgaggcccgcatgaagaagatcaccgac
gaggtgatggccgacatcgacaaggagaccgtggactggacgctcaacttcgacgatacg
attcccgaacccacggtgcttcccaccaagattccgctgctgatcgtcaacggcgcgagc
ggtatcgccgtcggcatggccaccaacatggccccgcacaacctgagcgaggtcgtagac
gcctgttgcgcctatatcgacaatcccgaaatcacgggcgaggagatgctgcagtatatc
aagggccccgacttcccgacgggaggtatcatctacggctacgagggtgtccgcgaggcg
atgcttacgggccgcggccgcgttatgatgcgcgccaagaccgatatcgaacataccccc
agcggccgcgagtgcatcgtcatcaccgagattccctacatgatcaacaaggccgagatg
atcaagaagatcgccgacatgatcaacgagaagaagatcgagggcatctcctacatcaac
gacgaatcggaccgcaacggccttcgcatcatcatcattctcaaacacgacgccgtcgcc
agcgtcgtgctgaacacgctcttcaagaatacgccgctgcagacttcgtttgcagtgaac
aatatcgcgctggtgaacggccgtccccagatgctgccgatgcgcgatctggtcaagcat
ttcgtcgatcaccgccacgacgtggtggtgcgccgtgcgcgcttcgacctgaagaaggcc
gaggaacgcctgcatatcgtgcagggtctgctgatcgcgcaggacaacatcgacgagatc
gtgcacatcatccgttcgtcgcagacgcccgacgccgccaagcagacgatgatcgagcgc
ttcaacctgagcgacattcaggcttccgccattatcgagatgcgcctgcgcgccctgacc
ggactcgaatacggcaagctgatcgccgagcgcgacgaacttaccaagcagatcgcctac
ctcaaggaggtgctcgaaaacgtcggcatgcagatgcagatcatcaaggacgagctgctc
gaaatcaaggagaaatacggcgacgaacgccgctcggagatcgtttactcttccgaggag
ttcaaccccgaagatttttacgccgacgacgacatggtcatcaccatttcgcacatgggc
tatatcaagcgtacgccgcttgccgagtaccgcacgcagaaccgcggcggcgtcggcgcc
aagggcagcgccacgcgcgacgaagacttcatcgaacatatctacgtggcctcgatgcac
aatacgatgctcttcttcacggagaagggccgctgcttctggctcaaggtgtacgagatt
ccggaaggcgcccgctcttcgaagggccgtgccatccagaacgtcatccagatcgaaccc
gacgacaaggtccgcgcctacatcaacgtcaagcgtctgaacgacgaggagtacgtcaac
aacaacttcatcatcatgtgtaccaaggacggtacgatcaagaagaccaagctcgaagcc
tactcgcgtccgcgtcagaacggcgtgaacgccatcgtcatccgcgagggcgaccagctg
atcgaagccaagctcaccagcggtcaggccgaggtgatgatcgcggcccgcgacggcaag
gccatccgcttcaacgagagcacggtgcgtcctatcggacgtgtcggtgcgggtgtccgc
ggcatctcgatcgaggagagcgacgaagtggtcggcatgatatgtgtcgaacccgattcg
aagcaggacgtactggtgctgagtgagaacggttacggcaaacgtaccgatctggacgaa
taccgcatcaccaaccgcggcggcaagggtgtgaagacgatcaatgtaacggagaaaacc
ggcaaacttatctccattcaggccgttacggacgacaacgacctgatgattatcaaccgt
tcgggacttaccatacgtacggcagtgtcgcagatccgccttgcgggccgcgcgacgcag
ggcgtgcgtatcatcaacctgcgcgagggcgacgccattgcttcggtgatggccgtaccg
gcagcgggcgatgaagacgaagaagtacaatccgcagaggtcgctgcaaccgggaatgac
gccactcccgaagcggaccgtccggcggaggagtaa
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