Alistipes finegoldii: Alfi_3069
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Entry
Alfi_3069 CDS
T02133
Name
(GenBank) glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
afd
Alistipes finegoldii
Pathway
afd00260
Glycine, serine and threonine metabolism
afd00460
Cyanoamino acid metabolism
afd00630
Glyoxylate and dicarboxylate metabolism
afd00670
One carbon pool by folate
afd00680
Methane metabolism
afd01100
Metabolic pathways
afd01110
Biosynthesis of secondary metabolites
afd01120
Microbial metabolism in diverse environments
afd01200
Carbon metabolism
afd01230
Biosynthesis of amino acids
afd01240
Biosynthesis of cofactors
afd04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Alfi_3069
09102 Energy metabolism
00680 Methane metabolism
Alfi_3069
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Alfi_3069
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Alfi_3069
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Alfi_3069
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Alfi_3069
Enzymes [BR:
afd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Alfi_3069
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AFL79310
UniProt:
I3YQP2
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Position
3472790..3474070
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AA seq
426 aa
AA seq
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MKRDTQIFDLIAAERSRQMHGIELIASENFVSEQVMEAMGSVLTNKYAEGYPAARYYGGC
EVVDKVETLAIERICRLYGAEYANVQPHSGAQANMAVFFAVLQPGDTFMGLDLAHGGHLS
HGSPVNMSGKYFNAVGYQLDEATGVIDYDAMERKALECKPKLIVGGASAYSREWDYKRMR
EIADKVGALLLVDMAHTAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGIILMGRDFEN
PWGLTTPKGAVKMMSQILNSAVFPGIQGGPLEHVIAAKAVAFGEALDPSYKEYQTQVQKN
AKAMAEAFVKRGYKIVSGGTDNHLMLVDLRTKFPELTGKLAEKCLVAADITTNKNMVPFD
SRSPFQTSGLRFGTPAITTRGLKEDKMDYIVGLIDRVLHDPENEDNIAAVRRDVNALMAD
YPLFAW
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagacacccagattttcgatctgatcgccgccgagcgcagccgtcagatgcat
ggcatcgaactgatcgcctcggagaacttcgtaagcgaacaggtcatggaggccatgggc
tccgtgctgaccaacaaatatgccgagggttatcccgcagcgcgctattacggcggctgc
gaagtcgtggacaaggtcgagacgctggccatcgagcgcatctgccgtctctacggcgcc
gagtacgccaacgtgcagccccactccggcgcgcaggccaatatggcggtattcttcgcc
gtgctgcagccgggcgacaccttcatgggactcgatctggcgcacggcggccacctttcg
cacggttcgccggtcaacatgtcgggcaaatacttcaacgccgtgggctaccagctcgac
gaggcgacgggcgtgatcgactacgacgccatggagcgcaaggcgctggaatgcaagccg
aaactgatcgtcggcggcgcttcggcctattcgcgcgaatgggactacaaacgcatgcgc
gaaatcgcggacaaagtcggcgcgctgctgctcgtggacatggcccacacggccggcctg
atcgccgcaggactgctggacaaccccgtgaaatacgcgcatatcgtcacttcgacgacc
cacaagaccctgcgcggaccgcgcggcggcattatcctcatgggcagggatttcgaaaac
ccgtgggggcttaccacacccaaaggcgcggtgaagatgatgtcgcagatcctcaactcg
gccgtattccccggcattcagggcggtccgctcgaacacgtcatcgccgccaaggccgtg
gctttcggcgaggcgctcgaccccagctacaaggagtatcagacgcaggtgcagaagaac
gccaaggcgatggccgaagcattcgtgaagcgcggctacaagatcgtttcgggcggcacg
gacaaccacctgatgctggtcgatctgcgcaccaagttccccgaactgacgggcaagctg
gccgagaagtgtctggtggcggccgacatcacgaccaacaagaacatggtgccgttcgac
agccgctcgccgttccagacttcgggtctgcgcttcggcacgccggccatcaccacccgc
ggcctgaaggaggacaagatggactacatcgtcgggctgatcgaccgcgtactgcacgac
cccgaaaacgaggacaacatcgccgccgtacgcagggacgtgaacgccctgatggccgat
tatccgcttttcgcttggtaa
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