Alistipes finegoldii: Alfi_3293
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Entry
Alfi_3293 CDS
T02133
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
afd
Alistipes finegoldii
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afd03016
]
Alfi_3293
Enzymes [BR:
afd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Alfi_3293
Transfer RNA biogenesis [BR:
afd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Alfi_3293
Prokaryotic type
Alfi_3293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AFL79521
UniProt:
I3YRA3
LinkDB
All DBs
Position
complement(3720170..3720934)
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AA seq
254 aa
AA seq
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MRYFLELRYNGAAYCGWQRQPDMPSVQQTLERALTTLLREKIEVTGAGRTDTGVNASYYV
AHFDCEEPVPDPAQVVYKLNFLLPGDIAVGSMTPVGADAHARFAAREREYRYYIEPRKNP
FTRDATWQYYVPLDMERMNEAAASLLEYDDFTSFAKLNSNNKTNICRIMHAAWTADERGV
LCFTIRADRFLRNMVRSLVGTLVDVGRGRYTPDGFREIVGSRDLSRSSGGAPAQGLFLSD
VVYPPGVFERKTFY
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcgttattttctcgaacttcggtacaacggagccgcctactgcggctggcagcgccag
cccgacatgccgtcggtgcagcagacgctggagcgggcgctcactaccctgctgcgcgaa
aaaatcgaggtgacgggggcgggccgcaccgatacgggcgtcaacgcttcctattacgtg
gcgcatttcgactgtgaggaaccggtgcccgatccggcgcaggtcgtctacaaactgaat
ttcctgcttccgggcgatatcgccgtcgggagcatgacgcccgtcggagcggatgcgcac
gcgcgtttcgcggcccgcgaacgcgaataccgttactatatcgaaccgcgcaagaatccc
tttacgcgggatgcgacgtggcagtattacgtgccgctggacatggaacggatgaacgag
gcggcggcttcgctgttggaatacgacgacttcacctcgttcgccaagctcaattcgaac
aacaagaccaatatctgccgcatcatgcacgccgcatggacggccgacgagcgtggcgtg
ctttgcttcacgatccgcgccgaccgttttctgcgcaacatggtccggtcgctggtcggg
acgctggtcgatgtgggacgcgggcgctatacgcccgacggcttccgcgagatcgtcggg
agccgcgacctttcgcggtcgagcggcggcgctccggcgcagggattgtttctgagcgac
gtggtctacccgcccggcgtattcgaacgaaaaacgttttactaa
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