Acidithiobacillus ferrooxidans ATCC 53993: Lferr_0004
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Entry
Lferr_0004 CDS
T00758
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afe03032
]
Lferr_0004
03400 DNA repair and recombination proteins [BR:
afe03400
]
Lferr_0004
Enzymes [BR:
afe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Lferr_0004
DNA replication proteins [BR:
afe03032
]
Prokaryotic type
DNA Topoisomerases
Lferr_0004
DNA repair and recombination proteins [BR:
afe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Lferr_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ACH82266
LinkDB
All DBs
Position
4042..6447
Genome browser
AA seq
801 aa
AA seq
DB search
MMMETYDSSSIQVLKGLEAVRKRPGMYIGDTDDGSGLHHMVFEVVDNAIDEALGGYCDTI
IVTIHEDESVSISDNGRGIPVDMHAGEGRSAAEVIMTVLHAGGKFDDNAYKVSGGLHGVG
VSVVNALSETLQLRIFRDGYVWTQEYHDGEPQAPIARGDASRKHGSTIRFKPSPQVFADT
HFHFEIIAKRLRELAFLNSGVHITLLDERASREETFHYEGGIRAFVEHLNRSKTAIHPSV
ITLTGERDGIVVEAALQWNEGYNEAVLCFTNNIPQADGGTHLAGFRGALTRTLNQYMERE
GIIAKAKVAVSGEDAREGLTAVLSVKVPDPKFSSQTKEKLVSSEVKPIVESSMSEALTMF
LDEHPKEAQAIAAKIVEAARAREAARRARELTRRKGALDIANLPGKLADCQEKDPAQCEI
YLVEGDSAGGSAKQGRDRRHQAILPLKGKILNVERARFDRMLSSDEIGTLITALGTGIGA
GDFDVAKLRYHRVIIMTDADVDGSHIRTLLLTFFYRQMPDLVARGHIYIAQPPLYKVKKG
KEERYLKDDGELAAYLREIAMQGAQFRPAADAEPVTDEQLGGMMRQYQNIEALVQRLERR
YPSTLLWALATLPPIVAESADSATWDDFARQLRAALEVNALPAEHYTVERVGEAEALRLV
VRREHHGSVELRFFDQDFFAGGEYRHLADYARQIEGKIGVGARMERGERGLAVSRFRTAM
DWLLADARRGVEIQRYKGLGEMNPEQLWETTMNAANRRLVRVDVEDAIAADEVFSMLMGD
AVEPRRRFIEENARFVSRLDI
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggaaacatacgattcttccagtatccaggtgttgaaaggtctggaagcggta
cgcaaacgccccggcatgtatatcggcgataccgatgacggcagcggactgcatcacatg
gtcttcgaagtagtggataacgccatcgatgaggcgctcggcgggtattgcgataccatc
atcgtgaccatccacgaggatgaatccgtcagcatcagcgacaacggtcgtggtataccg
gtggacatgcacgccggggagggccgatccgctgccgaagtcatcatgaccgtgctgcat
gcaggtggtaagttcgatgacaacgcctacaaggtttccggcggcttgcacggggttggt
gtctcggtggtcaacgccctttcggaaactctgcaattgcgcatcttccgtgacggttat
gtctggacccaggagtatcacgatggcgaaccccaggcacccatcgcccgcggcgatgca
tcacgcaaacatggcagtaccatccgcttcaaaccctcgccccaggtttttgccgatacc
cattttcacttcgagatcatcgcgaagcgcttgcgcgaactggcctttctcaattccggc
gtgcatatcaccctgctggatgagcgggccagccgggaggaaacctttcattatgaaggc
ggtattcgcgctttcgtagagcatctcaaccgcagcaaaaccgccattcatcccagtgtg
atcactctcaccggcgagcgcgacggcattgtcgtcgaagcggccctgcagtggaacgaa
ggctataacgaggcggtgctctgcttcaccaacaatattccccaggccgatggcggcacc
catttggcgggctttcgcggtgccctgacccgtaccttgaaccagtatatggaacgggaa
ggcatcatcgccaaggccaaggttgcggtgagtggcgaggatgcacgcgaaggattgaca
gcggtgctttccgtcaaggtaccggaccccaaattttcttcgcagaccaaggaaaaactg
gtctccagcgaggtcaaaccgatagtcgagtcctccatgtccgaggcgctgaccatgttt
ctggatgagcatcccaaagaggcgcaggccatcgccgccaagatcgtcgaagcggcgcgg
gcgcgggaagccgcccggcgggcacgggaactgacccgccgcaagggggcgctggacatt
gccaaccttcccggcaagctggccgactgtcaggagaaagatccggcccagtgtgaaatc
tatctggtggagggcgattccgcaggcggctctgccaaacagggccgggatcgccggcat
caggccatccttcccctgaagggcaaaatcctcaatgtggaacgggcgcgtttcgaccgg
atgctttcgtccgacgaaattggcaccctgattaccgcgctgggtaccggtatcggtgcc
ggggattttgatgtggctaagctgcgttatcaccgggtcatcatcatgacggacgcggac
gtggacggcagccacatccgcaccctgttgctgacctttttctatcggcagatgcccgat
ctcgtggcacgcggccatatttacatcgcccagccgcccctctacaaggtcaagaagggc
aaggaggaacgctacctcaaggatgacggcgaactggccgcctatctgcgtgaaattgcc
atgcagggcgcgcaattccgtcccgcggcggatgccgagccggtaacggatgagcaactg
ggcggcatgatgcgtcaataccagaacatcgaggcactggtgcagcgtctggaacggcgt
tatcccagtactctgctctgggccttggccaccttgccacccatcgttgcggagtcggcg
gatagcgccacctgggacgattttgcgcggcagctccgcgcggcactggaagtgaatgcc
ctgcccgccgaacattacacggtggagcgggtgggtgaagcggaggccttgcgcctggtg
gtgcgccgcgaacatcatggcagcgtggaactgcgtttcttcgatcaggatttttttgcc
gggggcgaatatcgacatctggcggattatgcgcggcagatcgagggcaaaatcggcgtg
ggagcgcgtatggaaaggggcgaacgagggcttgccgtcagccgtttccgcaccgccatg
gactggcttctggcggatgcccgccgtggcgtcgagattcagcgctacaagggactcggt
gaaatgaatccggaacagctctgggaaaccaccatgaatgccgcaaaccgccgtctggtg
cgggtggatgtggaagacgccatcgccgccgacgaggtcttttccatgctcatgggcgac
gcggtggaaccgcgtcggcgctttatcgaggagaatgcgcgttttgtatccagactcgat
atctga
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integrated database retrieval system
