Acidithiobacillus ferrooxidans ATCC 53993: Lferr_0353
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Entry
Lferr_0353 CDS
T00758
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Lferr_0353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afe03400
]
Lferr_0353
Enzymes [BR:
afe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Lferr_0353
DNA repair and recombination proteins [BR:
afe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Lferr_0353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ACH82607
LinkDB
All DBs
Position
complement(331913..332680)
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AA seq
255 aa
AA seq
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MAMRLYSWNVNGWRAACRKGLREWVATVQADALCFQEIKADPDRLPATETALDGYDARWA
VAERPGYSGVATFSRAPCRPLTTGLGIPRFDREGRVVVTDCGDFDLYNVYFPNGKKDTER
LAFKLDFYAAFLELINARVAAGRAVVFCGDVNTAHQAIDLARPKENARISGFLPEERACL
DQWAAAGWVDSFRHLHPDAVEYSWWSQRTDARARNIGWRLDYFWIHESLLPRLRGAGIAT
DVTGSDHCPVWLELD
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggccatgcgcctgtatagctggaacgtgaacggctggcgcgccgcctgtcgcaaaggg
ttgcgcgaatgggtcgcgacggtgcaggcggatgcgctctgcttccaggaaatcaaggcc
gacccggaccgcctgccggcgacggaaaccgcactggatggttacgatgcccgctgggcg
gtcgctgaacgcccgggttacagcggcgtcgccaccttcagcagagcgccctgccggccg
ctgacaacgggcctgggcatcccgcgcttcgaccgggaggggcgcgtggtcgtcaccgac
tgcggtgatttcgacctgtataacgtctactttcccaacggcaagaaggatacggaacgc
ctcgccttcaagctggatttctatgccgccttcctggaactgatcaacgcgcgggtcgcc
gccggccgggcggtggtattctgtggcgacgtcaacaccgcccatcaggccatcgacctt
gcacgccccaaagaaaacgcgagaatatccggttttctccccgaggaaagggcctgtctg
gaccaatgggcagcggcgggctgggtggacagcttccgccaccttcacccggatgccgtg
gagtattcctggtggagtcagcgcaccgacgcccgcgcccgcaatattggctggcgcctc
gattatttctggatacatgagagcctgttgccgcgcctgcgcggagcggggatcgccacc
gatgtgaccggctccgatcattgcccggtctggctggagttggattga
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