Acidithiobacillus ferrooxidans ATCC 53993: Lferr_0524
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Entry
Lferr_0524 CDS
T00758
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Lferr_0524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afe03021
]
Lferr_0524
03400 DNA repair and recombination proteins [BR:
afe03400
]
Lferr_0524
Enzymes [BR:
afe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Lferr_0524
Transcription machinery [BR:
afe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Lferr_0524
DNA repair and recombination proteins [BR:
afe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Lferr_0524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ACH82778
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All DBs
Position
483769..484788
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AA seq
339 aa
AA seq
DB search
MTEVGELLRPQGVDVEVISARRARLALGPLERGFGHTLGSGLRRVLLSSLKGAAVTEVEI
EGVLHEYSSIEGVQEDVVDILLNLKMLAVRAHGRGDAVVTLRKRGPGQMTGADIVSEHGI
EVANPEQVIATLTRDVELVLRLRIDEGRGYDAAATRRQSHEKRIGVMALDASFSPVLRVS
YLVENARVEQRTDLDRLILDVETNGVVDPVWAVQEAARIFRSQLGVLAGAETREIPEASQ
VQVSQSLTPLLIRPVDDLELTVRSANCLKAEDIFYIGDLVQKSEQELLKAPNLGRKSLNE
IKEVLVAHGLTLGMRLDSWPPENLPPVPGRAADTDSIIG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggttggagagctgttgcgcccgcagggcgttgacgtggaagtgatttcagca
cgccgtgcgcgtctggcccttgggcccttggagcgtggttttggccacactctgggtagt
gggttgcgccgggtgttgttgtcgtctctcaaaggtgcggcggttaccgaggtggagatt
gaaggggtgttgcacgagtactccagcatcgagggcgtgcaggaagacgtggtggatatc
ctgctcaacttgaagatgctggcggtacgggcgcacggacgcggagatgcggtggtgaca
ctgcgcaagcgtggccccggccaaatgaccggcgccgatatcgtatcggaacatggtatc
gaagtggcgaatccggagcaggtaatcgccacgctgacccgcgatgtggaactggtactc
cgtttgcgtattgacgaaggacgcggctacgacgcggcggctacgcgacgccagtcccat
gaaaagcgtatcggtgtgatggctctggatgcgagttttagtccggtgctgcgggtgagc
tatctggtggaaaacgcccgggtagagcaacgtaccgacctggatcgtctaatactggat
gtcgaaaccaatggtgtggtggatccggtctgggcggtgcaggaggcagcccgcattttt
cgcagccagctcggcgtgctggcaggtgcggaaacccgggaaatacccgaggcgtcgcag
gtgcaggtcagtcagagccttacgcccctgttgattcgtccggtcgatgatctggaactc
acggtgcggtcggcgaactgcttgaaggccgaagacattttttatatcggcgatctggtg
cagaaatcggagcaggaacttttaaaggcgcctaatctgggacgcaagtcgctcaatgag
ataaaggaagttttggtggcgcatggcctgacgttggggatgcgactcgacagctggccg
ccggaaaacctgccgccggtgcccgggcgggcggccgatacggactcgatcatcggctaa
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