Acidithiobacillus ferrooxidans ATCC 53993: Lferr_0554
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Entry
Lferr_0554 CDS
T00758
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afe03021
]
Lferr_0554
03009 Ribosome biogenesis [BR:
afe03009
]
Lferr_0554
Transcription machinery [BR:
afe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Lferr_0554
Ribosome biogenesis [BR:
afe03009
]
Prokaryotic type
rRNA transcription factors
Lferr_0554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
DUF4332
KH_NusA_C
KH_2
EXOSC1
Motif
Other DBs
NCBI-ProteinID:
ACH82808
LinkDB
All DBs
Position
517416..518897
Genome browser
AA seq
493 aa
AA seq
DB search
MSRELLYLADAVAHEKDVDREVIFLALEASLVSASKKKYGQDWHIAVDVDRKTGDYVTRR
LWEVVADDVADYDVDQQIRLSDARKTRPEAEPGDYLEEVLPPVEFGRIAAQTAKQVIVQK
VRDAERDRIVSDFAIRKGDIVSGLVKRMEKGNAIVDMGRAEAILPKEEMMPREAIRPGDR
VRAHLQDVRRVQRGPQLFLSRTSPELLIKLFAQEVPEIGNGMIEIMGAARDPGLRAKLAV
RSNDPRVDPVGACVGLRGNRVQTVINELKGERIDIVIWAADPASYVINALSPAEVSSIVV
DENTHSMDVVVGPEHLSQAIGRGGQNVRLATQLTGWTINILTEEEAQAKREEEESTFLNH
FIQDLGVDEDLAALLVSEGFTSIEEVAYVPVAEMMEIDGLDENLVGELRRRARDVLLNKA
IAQEEQVALSEPAEDLLSLKGMDKGLAHLLASKGVVTSEDLAELAASELCEMVGVDEERA
KALILEARAPWFA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtgaacttctttatctggcggatgccgtcgcccacgagaaggatgtggaccgg
gaagtcattttcctggccctggaggcatctctggtctccgcatccaaaaagaagtatggg
caggactggcatatcgcggtggatgtggatcgtaagaccggagattatgtaacccgtcgg
ctgtgggaggtggttgcggatgatgtcgcggattatgacgtggatcagcagatccgtctg
agcgatgcccggaaaacccgccccgaagcggagccgggtgactacctcgaagaggtgttg
ccacccgtcgagttcgggcggatcgcggcacaaacggccaaacaggtaatcgtgcagaaa
gtgcgggatgccgagcgcgaccggatcgtatcggactttgcgatacgcaagggggatatc
gtcagtggtctggtcaaacgcatggaaaaaggcaacgccatcgtcgacatggggcgcgcc
gaggccattctgccaaaagaggagatgatgccgcgcgaggccatccgccccggtgaccgg
gtgagagcacatctccaggatgtacgtcgcgtgcagcgggggccgcagctttttctttcg
cggaccagtcctgagttgctgatcaagctgttcgcccaggaagtgccggaaatcgggaac
gggatgatcgaaatcatgggtgcggcgcgtgatcccggcctgcgggcgaagctggccgtg
cgttccaacgacccgcgcgtggaccccgtgggggcttgtgtgggcctgcgcggtaaccgg
gtacagacggttatcaacgagttgaaaggcgagcggattgacattgtgatctgggcagcc
gatccggccagctatgtgatcaacgccctttcacccgcggaagtgtccagcatcgtggtc
gacgagaacacccacagtatggatgtggtggtcggaccggagcacttgtcccaggccatc
gggcggggcggtcagaatgtacggctggcgactcagttgacgggctggaccatcaacatt
ctgaccgaggaagaggctcaggccaagcgggaagaggaagagtcgacctttctcaaccac
ttcatccaggatctgggtgtggatgaggatctggccgccctgctggtcagcgagggtttt
acctccattgaggaggtggcctatgttccggttgccgaaatgatggaaatcgatggtctg
gacgagaacctcgtcggcgaattgcggcgccgtgcgcgtgacgtcctgctcaacaaggcc
attgcccaggaagaacaggtggcgctcagtgaacccgcggaagatttgttgtccctgaaa
ggtatggataagggtttagcgcacttactggccagtaaaggtgttgtcacttccgaggac
ctggcggaactggctgcgagcgagctatgcgagatggtcggtgtggatgaagagcgggcc
aaggctctcattctggaggcgcgtgcgccctggtttgcttga
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