Acidithiobacillus ferrooxidans ATCC 53993: Lferr_0583
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Entry
Lferr_0583 CDS
T00758
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
afe01011
]
Lferr_0583
Enzymes [BR:
afe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Lferr_0583
Peptidoglycan biosynthesis and degradation proteins [BR:
afe01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Lferr_0583
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM_RLK
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
ACH82837
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All DBs
Position
complement(541351..543189)
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AA seq
612 aa
AA seq
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MKKRVLAMATLVALGGIPMAWADSQTIGLQQGDLQTGVAQALNAGAQNVDLQSGEPVAGP
VGNVSGLSATLQQFEASGAFGNQTGAGNVWTHIDDGLRISDVSRLEVDKWRTWFLQHQGK
LEQILDNSRPFLYYVVNAVAERGMPMELALLPAIESGYNPKAYSPAAAAGLWQFIPGTAR
NFGLQNTRYGDPRLSLIASTNAALDYLSYLYNYFGGNWLLAIASYNAGQGTVSAAIQQNV
AAGKPTDFWDLSLPQQTEDYVAELLALAQVIKNAKAYHVSLPAIPNAAHIAVVTTPKSVA
LNVAANLMNMPVSELQHLNAGLSYGVAPADYHLVVPKDKAATLKSALLTMPQEAAAQPVV
ALRPAPSPAFRRVMLRPGETLWHLAQRAGVSVTNLERWNHIRSARDLQVGQHLVVYGAGG
SGHLQNAVYARSRARALTVRPGNTPSQLAQRAGVSVKDLMRWNHIRSARDLQIGETLHIP
GGGGSRPAQVYTAARGNRRLTVRPGESLWQIARRAGVGVSLLARANHLTERTILHPGQVL
NIPAQTMVAAISRRQERAASRARTTTYVVRPGDTLWQIAQQFHVQPKSLIQWNRLASASE
IQPGSRLTIYTR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcgagttctcgctatggccacgctggtggcactcggcggcattcctatggca
tgggcggatagccaaaccataggcctgcaacaaggtgacctccagaccggcgtagcacag
gccctgaacgccggcgcgcagaacgtggacctgcaaagcggcgaaccggtagcggggccg
gtcggcaacgtctccggcctgtcggccaccctgcagcagttcgaggcatcgggcgccttt
ggcaaccagacgggagccggcaatgtctggacccatatcgacgacggcctgcgcatcagc
gacgtctcccgcttggaagtggataaatggcgtacctggttcctgcaacatcagggcaag
ctggaacagatcctcgacaactcccgcccctttctgtattacgtggtgaacgccgttgcg
gaacgcggcatgcccatggaactggcgctgctgccggccatcgagagcggttacaacccc
aaggcctactccccggcggccgcggcgggcctctggcaattcatacccggcaccgcacgc
aatttcggcctgcaaaacacccgctatggcgatccccgcctgagtctcatcgcctccacc
aacgccgccctcgattacctctcctacctctacaactatttcggcggcaactggctcctc
gccatcgcctcctacaacgccgggcagggtaccgtttccgccgctatccagcagaatgtc
gcggcgggtaagcccaccgatttctgggacctctctctgccgcagcaaaccgaagactac
gttgccgaactcctcgccctggcgcaggtcatcaaaaatgccaaggcctaccatgtctcc
ctgcccgccattcccaacgcggcacacatcgcggtcgtgaccacgcccaaatccgtggcc
ctgaacgtggcggcgaacctgatgaacatgccggtcagcgaactgcagcacctcaatgcc
gggttgagctacggcgtcgccccggccgactaccatctggtggtgcccaaagacaaggcc
gccaccctgaagagcgcgctgctgaccatgccccaggaagccgccgctcagcccgtcgtt
gcgctgcggccagcgcccagcccggccttccgtcgcgtcatgcttcgccccggtgagacg
ctctggcatctggcgcaacgggccggcgtcagcgtcaccaatctcgagcgctggaatcac
atccgttccgcgcgcgacctgcaggtcgggcaacacctggtcgtctacggcgccggtgga
tccggccatctgcaaaacgccgtctatgcccggagccgggcgcgggcgctcaccgtgcgt
cccggcaacacgccctcccagctcgcgcagcgggccggcgtcagcgtcaaggacctcatg
cgctggaaccatatccgttccgcgcgtgacctgcagatcggtgaaaccctgcatatcccg
ggtggcggtggtagcaggcccgcacaggtctataccgccgcgcgcggcaaccggcgcctc
accgtgcggcccggtgaaagtctttggcaaatcgcccggcgcgccggagtgggcgtctct
ctgctggcccgcgccaaccatctcaccgaacggaccatcctccatcccggacaggtgctg
aacatcccggcacaaaccatggtcgccgccatcagccgccggcaggaacgcgccgccagc
cgggcgcgaacgacgacttacgtggtgcgtccgggcgacacgctctggcagatcgcccag
cagttccatgtccagcccaagtcgctgattcaatggaatcgcctggcctccgccagcgaa
attcaaccgggctcacgcctcaccatttatacgcgctga
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