Acidithiobacillus ferrooxidans ATCC 53993: Lferr_1121
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Entry
Lferr_1121 CDS
T00758
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Lferr_1121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afe03019
]
Lferr_1121
03009 Ribosome biogenesis [BR:
afe03009
]
Lferr_1121
03036 Chromosome and associated proteins [BR:
afe03036
]
Lferr_1121
Enzymes [BR:
afe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Lferr_1121
Messenger RNA biogenesis [BR:
afe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Lferr_1121
Ribosome biogenesis [BR:
afe03009
]
Eukaryotic type
90S particles
RNase
Lferr_1121
Prokaryotic type
rRNA processing factors
Lferr_1121
Chromosome and associated proteins [BR:
afe03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Lferr_1121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ACH83363
LinkDB
All DBs
Position
1097991..1098671
Genome browser
AA seq
226 aa
AA seq
DB search
MDVLESLQQSVGYQFREQSLLLQALTHRSAGARHNERLEFLGDAALNFVVAAKLFARFPK
VSEGDLSRMRARLVREETLAEIAGKIALADSLILGPGEIRSGGARRDSIRADALEAVIGA
AFLDGGFGAAERIVAQLVEPLMTDDLGGEELRDPKTRLQEFLQGQGRPVPVYTTVAEKGQ
AHERRFVARCSVPGAEATEAEDGSRRKAEQQAAALMLAQLQVAVHG
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggatgttttagaatctctgcaacagtcggtcggctatcaattccgtgagcagtccctg
ctgttgcaggcgctgacccatcgaagtgcgggcgcccggcacaatgaacggctggagttt
ctgggggacgcggcactgaattttgtagtagcggcaaaactcttcgcccgctttcccaag
gtgagcgagggggatctgtcgcggatgcgggcacggctggttcgggaggaaaccctggcg
gagatcgccggaaaaatcgctttggccgattccctgatcctgggccccggagaaatacgc
agcggtggcgcccggcgagactccatccgcgccgatgccttggaggcggtgattggtgcg
gctttcctggatggcggctttggtgcggcggagcgtatcgttgcacaactggtcgagccc
ttgatgactgatgacctgggtggcgaagagttgcgcgatcccaaaacgcgcctgcaggaa
ttcctgcagggacagggacgtcctgtacccgtctatacgacggtggcggaaaaaggacag
gcccatgagcggcgtttcgtggcgcgttgcagtgtgcctggcgccgaagctaccgaagcg
gaggatggcagccggcggaaagccgaacagcaggcggcggcgctgatgctggcacaactg
caggttgccgtgcatggatga
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