Acidithiobacillus ferrooxidans ATCC 53993: Lferr_1244
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Entry
Lferr_1244 CDS
T00758
Name
(GenBank) transcriptional regulator, NifA, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Lferr_1244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afe03000
]
Lferr_1244
Transcription factors [BR:
afe03000
]
Prokaryotic type
Helix-turn-helix
Other families
Lferr_1244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA
bpMoxR
AAA_16
Torsin
AAA_3
GAF_3
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
ACH83482
LinkDB
All DBs
Position
1210955..1212592
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AA seq
545 aa
AA seq
DB search
MKDRVTPNHFQELTTIYEVSKVLSSSMDLEHTLNDVLKTLESHLHISPSMIVLRMNEEIV
GVIAATGLSVAEIERGRYRLGEGMIGKIMRAGMPIVIPDVSQEPAFLHRAFEPEISQRLH
AFVGVPIKVGYECIGVLAIYRSERHKGVSFRSDVRLLQMIANLVGQTVNLHQGISAERNR
LLQEKHRLQKELQKRYSIKNVIGNSRAMQAVFADVHQAAPGKATVLLRGESGTGKEVIAR
AIHYLSPRRDKAFVSLNCAALPESILESELFGHERGAFTGATQERKGRFELADGGTLFLD
EIGDISPAFQAKLLRVLQEREFERVGGTQTRRVNVRIIAATNRNLEEAVSKGEFRADLYY
RINVVSIFLPPLRERREDIPALIEHFLARYNAENQRKLTLTPEALQTMVSCYWPGNVREL
ENCVERTATMMRGDIIRNLDVPCQRNQCLSMALRPLEGSHPIVTMKLSSGMSVPPHAAPD
VEGQVTDASGAGDGEGSLPLSERDRLIQAMDRCGWVQAKAARLLGTTTRKLGYALNKHGI
EVKKL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatcgcgtaacacccaaccattttcaggagctgacgaccatctatgaggtgagt
aaggtgctcagctcttccatggatcttgaacacactctgaacgatgttctgaagacgctg
gagagccatctgcatatctcaccgtccatgatcgtattgcgcatgaacgaggaaatagtg
ggggtaatcgcggccacggggttgtccgttgcggaaatagaacgggggcgttatcggttg
ggggaggggatgattggcaagatcatgcgtgccggcatgccgatagtgattcctgatgtc
tctcaggaaccggcttttctgcaccgcgcctttgaaccggagatcagtcagcgcttgcat
gcttttgtaggggtgccgatcaaggtgggatatgagtgtatcggtgtgctcgccatctat
cgcagtgagcgacacaaaggcgtgagtttccgttccgatgtccgcttgttgcagatgatc
gccaatctggtgggacagaccgttaatctgcatcagggtatctccgcggaacgaaaccgc
cttttgcaggaaaagcatcgtctgcagaaggagttacagaaacgatacagcatcaagaat
gtcatcggcaacagccgggccatgcaggcggtattcgccgatgtgcatcaggcggcaccg
ggcaaggcgacggtgttgctgcgcggtgaatccggcaccgggaaggaagtcatcgcccgc
gccattcattatctcagcccccgtcgcgacaaagcctttgtttcgctcaattgcgcggcg
ctcccggaaagcattctcgagtcagaactcttcggacatgagcgcggcgcgtttaccggc
gccacccaggagcgcaaagggcgctttgaactggcagatggcggcacgctgtttctcgac
gagatcggcgacatctctccggcttttcaggcgaagctcttacgggtgctgcaggagcgt
gaattcgagcgggtaggcggaacgcagacccggcgggtcaatgtgcgcattatcgcagcc
accaatcgcaacctcgaagaggcggtgagcaagggcgagttccgcgccgatctgtactat
cggatcaatgtcgtcagtatttttctgcccccactgcgggagcgtcgcgaggatatcccc
gccttgatcgaacatttcctcgcccgttacaacgccgagaatcagcgcaaactgaccctc
accccggaagccttgcaaaccatggtgtcctgctactggccaggtaacgtgcgggaattg
gaaaactgcgtcgaacgtaccgccaccatgatgcgcggcgatatcatccgcaatctggac
gtgccctgtcagcgcaatcagtgcctgtccatggccttgcggccgctggaagggagtcat
cccatcgtcaccatgaagctgtcgagcggcatgagtgttccgcctcatgcagcgcctgat
gtggaggggcaagtgacggatgcatccggggctggtgatggggaaggttccttgcctttg
tcggagcgggatcgcctgatccaggccatggaccgctgtggctgggtacaagccaaagcc
gcccgtttattggggacgaccacccgcaaactcggttatgccctcaataagcatggcata
gaagttaaaaaactctaa
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