Acidithiobacillus ferrooxidans ATCC 53993: Lferr_1415
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Entry
Lferr_1415 CDS
T00758
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS
PAS_9
CZB
PAS_3
PAS_7
PAS_8
PAS_10
DUF2878
Motif
Other DBs
NCBI-ProteinID:
ACH83647
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Position
1372189..1375326
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AA seq
1045 aa
AA seq
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MFYKYSTDNVQGRSLNHSHQQSPRHNSYVPRWLHRLWLGFMAVVLVAGAWLAWSDWQQTR
SWEISGLRTLVASVAEGTRVMLDGTRISLVLLGRQLESGSPVLGPGAGKMLRDYLALQPD
LAAVGTRIPDGQVLTAGGGRHFLADLLFALDNPVNARRLGLNPVQRSALAQCLHSPGFCL
GPPVRDVFAGAGHGLWMIPLFQVVPIKGGSRQLVALLPLVDGRMPSWRGLPLPSRVSIFL
LRDDGFLESRSPPPTQTTYAVRQHGIAARYVLAHPELPSGVYYGLSTAVDQWRLGAVQRI
KGYPLVAGVGIPRSVLWADWWNSVEGPAAGAFGLLLLSIFGYGYLRRVGREREGERQSAE
QTLWEEKERAEVTLHSIGDAVITTDTEGRVMDMNVVAEALMGYARTEAVGRPLEDVFRIV
QEGSHAHLDNPVRRVLEEGQVVRLANHTMLLTKDGQERAIEDSAAPIRDRQGVLLGVVLV
FHDVTEKRRLIAELAHQATHDALTGLPNRVLFMDRLGHDRAQTLRHEHLLAVGILDLDGF
KQVNDHFGHAAGDALLQEMAQRLRREMRSGDTLARMGGDEFGLLLSDVGSLEQVEDACTR
LLEVLRAPFYLGDEEIPLSSSIGLTSYPLDDSLPEDLLRHADLALYAAKAAGRDRYHWFD
WPMDKLQQEAMEVRKMTENALDRGRLLLHYQPVVEIGNGPVGVEALIRLDHPERGLLPPA
AFAAALDAPRLTRHIGCFVLATALTQTQTWHRQGMPLRVSVNISAHHLLDQRFLSDLRAA
LDAHPDLPPSAVEIEITETAPLLDFAGARETLLACNRLGVRIALDDFGTGNASLTYLQKL
PAQTIKIDQSFVRDIINDPKDYAIVSGVVTSARLLGLEVIAEGVETAEHAAMLGHLQCHC
LQGYAIARPMAPEAIPGWIRQYKPLLYHGFSATPTPTSMISIHNQRVKRFIGALRHQAPF
PSLVIEPEAEQQCHLGLWLQGEGRLQYGDDAAFYQQLLARHAHLHALAREAKALYDAGDG
EGAEQKGAELERENQALNSLIITTH
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgttttataaatatagtaccgacaacgtccagggacgcagtttgaatcactcgcaccag
caatcgccccgacacaactcctatgtcccgcgctggctgcaccggctttggctgggtttc
atggcggtcgtgttggtggcaggggcatggctggcctggtccgactggcagcaaacccgg
tcttgggagatatccggccttcggacgctggtggcatcggtggcggaggggacgcgggtg
atgctggatggcacccggatctcgctggtgttgctggggcggcaattggagtcgggttcg
ccggtcctgggccccggcgcaggaaaaatgctgcgggactatctcgcgctgcagccggat
ctggccgctgtggggacccgcatacccgatgggcaggtgctaacggcaggcggaggccgg
catttcctcgccgatctcctgtttgccctcgataacccggtgaatgcccggcggctgggg
ctaaatccggtgcagcggagcgcgctggcccaatgcctgcattccccgggcttctgcctt
ggccctccggtacgcgatgttttcgccggggccggtcatggcctctggatgatccccctc
tttcaagtagttccgatcaagggcggcagccggcaattggtcgccttgctgccgctcgtg
gacggtcgcatgccgtcctggcgggggctgccgctgccatcccgggtgtccatcttcctg
ctgcgggacgacggcttcctggaaagccgttctccgccgcccacccagaccacttacgcc
gtccgccagcacggcattgccgcgcgctatgtccttgcccatccggaactgccgtcgggc
gtctattatggcctgtccacggcggtggaccagtggcgcctgggtgccgtgcagcggatc
aaaggctatcccctggtggcaggggtgggcattccgcgttccgttttgtgggcggactgg
tggaatagcgtcgaggggccagccgccggtgcgttcggtctgctgctgttgtccatcttc
ggctacggctacctgcggcgggtcggccgagagcgggagggggaacggcaaagcgcggag
cagaccctgtgggaggagaaggagcgggcggaagtcaccctgcattccatcggggatgcg
gtgatcaccaccgataccgaaggccgggtgatggacatgaacgtcgtcgccgaagcgttg
atgggctatgcccggacggaagccgtgggcaggcccctggaagacgtcttccgcattgtc
caggaaggcagccatgctcatttggacaatcccgtccggcgagttctggaagagggccag
gtggtgaggctggccaaccacaccatgctcctcaccaaggacggccaggaacgcgccatc
gaggacagcgcggcgcccatccgagaccggcagggcgtactgttgggcgtggtcctggtc
ttccacgacgtcaccgagaagcgccggctgatcgccgaactggcccatcaggccacccac
gacgccctcacgggcctccccaaccgggtgctcttcatggaccggctgggccatgatcga
gcccagaccctgcgccatgagcacctgctggcggtgggtatcctggacctggacggcttc
aagcaggtcaatgaccacttcggacatgccgctggcgacgccctgctgcaggaaatggca
caaaggttgcgtagggaaatgcgttccggggacaccttggcacgcatgggcggcgacgag
tttgggctgctcctctcggatgtcgggagcctggaacaggtggaagacgcctgcacgcgc
ctgctggaagtgctccgcgctcccttctatctgggagacgaggagatcccgctgtcctcc
agcatcggcctgaccagctatccgctggatgacagcctgccggaggacctcctgcgccat
gcggatctggccctctatgcggccaaggccgccgggcgggatcgctatcattggttcgac
tggccgatggacaagctgcagcaagaggccatggaggtgcggaagatgacggaaaatgcg
ctcgatcggggccgcctgctgctccactatcagcccgtggtggagatcggcaatggtccc
gtgggcgtggaggccctgatccgcctcgaccaccccgagcgcggcctgctgcctcccgcc
gccttcgccgccgccctcgacgcaccgcgcctgacccggcacatcggctgcttcgtgctt
gccacggctctgacccagacccagacttggcatcggcagggcatgcccttgcgcgtctcg
gtgaatatcagcgcccaccatctcctggaccagcgctttctgtccgacctgcgggccgcc
ctcgacgcccatccggatctgcccccatccgccgtcgagatcgagatcactgaaacggcc
ccgctgctggatttcgccggggcgcgggaaaccctgctggcctgcaaccgcctgggagtg
cgcatcgccctcgacgacttcggcaccggcaacgcctcgctgacctatctgcagaagctg
cccgcgcagaccatcaagatcgatcagagcttcgtgcgcgacatcatcaacgatcccaag
gattacgccatcgtctccggcgtggtcaccagcgcccgactcttgggcctggaagtgatt
gccgaaggggtggaaacggccgaacacgccgccatgcttggccacttgcagtgccactgc
ctgcaaggctatgccatcgcccggcccatggcaccggaagcgatcccgggttggatcaga
cagtataagcctttgctttatcatggtttttctgcaacgcctaccccaactagcatgatt
tcaattcataatcaacgtgttaaaagatttattggagcgctgcgccaccaggctcccttt
ccctccttggtcatcgaacccgaggcggagcagcaatgccatttgggactatggttgcaa
ggggaaggaaggctccaatatggggacgacgcggccttctaccagcaattgctggcacgg
cacgcccatctgcacgccctagcccgggaagccaaggccctgtacgacgcgggggacggg
gaaggggcggagcagaaaggggcggagttggaacgggaaaaccaagcgctgaactcgctc
atcatcacaactcattga
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