Acidithiobacillus ferrooxidans ATCC 53993: Lferr_1442
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Entry
Lferr_1442 CDS
T00758
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Lferr_1442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afe03400
]
Lferr_1442
DNA repair and recombination proteins [BR:
afe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Lferr_1442
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Gene cluster
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Motif
Pfam:
RNase_T
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
ACH83673
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Position
1398677..1399339
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AA seq
220 aa
AA seq
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MRALIFDTETTGRVEPELIEAAWLAVSDLRTLEVEEQFVQRYRPAKPIEMGAMAVHHILE
EDLLESPPASSFRLPEDTGYLVGHSIDYDWGVIGKPDVKRICTYAMTRKLWPEVDSHSQS
ALMYHFSKDKRKTRDNLKNAHSALADVKFCRILLNKVILSVRPNSWEDLWEFSERARIPE
TMPFGKHKGVKIADLPDDYRRWALNNLTDMDTYLRKALEA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcattgatttttgatacagaaacgacgggtcgggtggagcctgagctgatcgag
gcagcctggctggcggtaagcgatctgcggacgctggaggtcgaggagcagttcgtgcaa
cgttaccggccggccaagcccatcgagatgggagccatggcggttcaccatattcttgag
gaggacctcctcgaaagcccgcccgccagcagttttcgcctgcccgaagataccgggtac
ctggtcggtcacagtatagattacgactggggcgtgatcggcaagcccgacgttaaacgc
atctgcacctatgccatgacccgcaaactctggcccgaggtggacagccattcccagtcg
gcattgatgtaccacttcagcaaggacaagagaaagacccgggacaacctcaaaaatgcc
cactcggcgctggccgacgtgaagttctgccggattctgctgaacaaggtcatcctctcg
gtgcggcccaactcctgggaagatttgtgggagttcagcgagcgtgccaggattcccgaa
accatgcccttcggcaagcacaagggtgtgaagatagccgacctgcccgacgattaccgg
cgctgggctctgaataaccttaccgatatggatacttacctgcgcaaggcgctggaagcc
tga
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