Acidithiobacillus ferrooxidans ATCC 53993: Lferr_1628
Help
Entry
Lferr_1628 CDS
T00758
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe00550
Peptidoglycan biosynthesis
afe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Lferr_1628
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afe01002
]
Lferr_1628
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
afe01011
]
Lferr_1628
Enzymes [BR:
afe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Lferr_1628
Peptidases and inhibitors [BR:
afe01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
Lferr_1628
Peptidoglycan biosynthesis and degradation proteins [BR:
afe01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Lferr_1628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ACH83850
LinkDB
All DBs
Position
complement(1594299..1595801)
Genome browser
AA seq
500 aa
AA seq
DB search
MRSDGRLWKGDGGRLWRYFFVGILPFFWLMPAIAATGQKDANTQFGDGQWSILIQDVQKG
RPTLSVQADHGQLPASTAKLLTTAYILHELGPESHQKTRILARTIDDGVVRGPLIFLGGG
DPDLSSRRFPFVRRTVRDDPMYPMRMLAAQVWAAGVRQIPEGILADATYFPADSALPGWT
EQDQRYWYGAPIHALMFNDAMIAVRIRPGRAPGVRTNAEIMPNPGGFIRNTVITVSAEDP
IRPVRLEKSGSGYLLTGAISAKGGIFAAMLAQPDPAYFAAVALRQALEEKGILVGNPIQA
LNNKRGAKQSRGYAHYALLAKHESPPLVEEITVANKVSENTHVEVLLRDADLARGGDGSR
ASTMQGLHRWLSVNGILDTQSRLVDGCGLSREDRLSAADLVRMLLHSYQEPWGGSWRDSL
PVNAEDGTLRHRLSALPAGTVQAKTGTLRDALSLAGFIRDNLGHPQYAFAILVEHFRGSE
ERIRRRMDALVQRVALSGPM
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcggatgggaggctgtggaaaggggatggaggccggttatggcggtattttttt
gtcgggatattgccgtttttctggcttatgcccgctatcgccgctaccggccagaaggac
gcaaacacccagtttggcgacggccaatggagtattctgattcaggatgtgcaaaagggc
aggcccactctgagtgtgcaggcagatcatggacaactgcctgcgtccacagcgaagctg
ctgaccacagcgtatattctgcacgaactggggcctgaatctcaccagaaaactcggata
ctggcccggaccatcgatgatggcgtagtgcgggggcccttgatttttctggggggtggc
gaccccgatctttccagccgtcgcttcccgtttgtcaggcgaacagtacgagatgacccc
atgtaccctatgcgcatgcttgccgctcaagtatgggctgcgggtgttcgccaaattccg
gagggtattctggccgatgccacgtactttcccgcagatagcgcgctaccgggttggacg
gaacaggatcagcgctattggtatggcgcaccgatccatgcactcatgttcaacgacgcc
atgatcgcggtacgaatcagaccggggcgggccccgggggtacgcaccaacgccgagatc
atgcccaacccgggagggttcattcggaacacggtgatcaccgtttcggcggaggatccc
attcgtcccgtacgcctggaaaaatctggaagcggatatctattgactggcgcgatttcc
gccaagggcggtatttttgccgcgatgctggcgcagcctgatccagcctattttgccgcc
gtagcattgcgacaggctttggaggaaaagggtattcttgtaggtaatcctatccaagca
ttgaacaacaagcgcggtgcaaagcagtccaggggatatgcgcactatgccttattggcc
aaacacgagtcaccgccattggtggaggagatcacggtggccaacaaggtgagtgaaaac
acccatgtagaagtactgctccgggatgcggatctggctcgcggcggtgatggaagccgt
gcatcgaccatgcagggcttgcaccgttggctttctgtgaacggtatacttgacacccaa
tctcgactggtagatggctgcggattatctcgtgaggatcgcctcagcgccgcagatctg
gtgcgtatgctgttgcactcttatcaggaaccctgggggggctcctggcgcgattcgctg
ccggtcaatgccgaagatggaacgctccggcatcgtctgagcgctctgcctgcgggtacg
gtgcaagccaaaacgggtactctgcgcgatgcgttgtctcttgctggttttattcgggat
aacctcggccacccacaatatgcgtttgccattttggttgaacatttccgaggctctgaa
gagcgtatccgcagacgaatggacgccctggtgcagcgtgtcgctttgagcggccccatg
tag
DBGET
integrated database retrieval system
