Acidithiobacillus ferrooxidans ATCC 53993: Lferr_1784
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Entry
Lferr_1784 CDS
T00758
Name
(GenBank) Squalene synthase
KO
K10208
4,4'-diapophytoene synthase [EC:
2.5.1.96
]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe00906
Carotenoid biosynthesis
afe01100
Metabolic pathways
afe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Lferr_1784
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
afe01006
]
Lferr_1784
Enzymes [BR:
afe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.96 4,4'-diapophytoene synthase
Lferr_1784
Prenyltransferases [BR:
afe01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Lferr_1784
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ACH84005
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All DBs
Position
complement(1764960..1766165)
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AA seq
401 aa
AA seq
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MTATGRGAQIRVGGIGLQDLQNGPGIVTLPPDDRVFVHTRTNTTRSLDVTRQDRMLMAAL
ERALAYQAQSLQVVSRTFALTIPQLPEALRDAVGNGYLLCRIADTIEDDPDMPWEKKACW
QAKFLQVVEGADDPAAFAAALGADLSPEMPEAEHDLIRHTPEVVAITHSLNPTQQAALSR
CVRIMGMGMAEFQQHASLQGLADMAALDRYCYVVAGVVGEMLTSLFVEFEPLLAEHDAEM
QRLAVSFGQGLQMTNILKDIWDDWQRGVSWMPRALFQRHGCDIAGVRPGSRDPAFQAGLT
ELLGIAANHLQNALRYTLLIPAGQTGMRDFCLWAIAMAVLTLRRIAENPAFASGSEVKIS
RRSVHRVVFLSRLLHRSDALLQWSFRVGVKPLPLPSAVAQP
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcgacgggtcgcggtgcgcagatccgggtgggcggcatagggctgcaagacttg
cagaatgggccggggatcgttacattgccgccagatgacagggtgtttgtgcacacccgg
acaaacacaacaaggagtttggatgtcaccagacaggaccgcatgttgatggcggcgttg
gagcgggctttggcgtaccaggcacaaagccttcaggttgtttccagaacttttgccctg
accatcccccagttgccggaagcgctccgggacgcagtcggtaacggttatctgttgtgc
cgcattgccgacaccattgaagacgatccggatatgccctgggaaaaaaaagcctgttgg
caggccaaatttcttcaggtcgtggagggtgcggacgatcccgccgcctttgctgccgca
ttgggcgcagacctgtcgccggagatgcccgaagccgagcacgatctgattcgccacact
ccggaagtcgtcgccatcacccacagcctcaaccccacccagcaggcggcattgtcccgc
tgcgtgcggatcatgggaatggggatggcggagtttcagcagcatgcttcgttgcagggg
ttggcggacatggcggccctggatcgctactgctatgtggttgcgggtgtcgtcggtgaa
atgctcaccagcctatttgtcgagttcgagccgctgctggcggagcatgatgcggagatg
cagcgtttggcggtgtccttcgggcagggcctgcagatgaccaatattctcaaggacatc
tgggatgactggcagcgcggtgtgagctggatgccacgcgcgctgtttcagcgtcatggc
tgcgatatcgcgggggtgcggcccggcagtcgggaccccgcgttccaggcgggcctcacc
gagctgctgggtattgccgcgaaccatctgcaaaatgcgctgcgctatacgctgctgata
ccggccgggcagacggggatgcgggatttttgcctctgggccatcgctatggcggtgctg
accctgcggcggattgccgaaaatccggcctttgcctccggaagcgaggtgaaaatcagc
cgccgcagcgtacatcgggtggtatttctgtcgcgtctcctgcatcgctccgatgcgctc
ctgcagtggagtttccgggtgggcgtcaaaccactgcctttgccttccgctgtcgcgcaa
ccatga
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