KEGG   Acidithiobacillus ferrooxidans ATCC 53993: Lferr_2413
Entry
Lferr_2413        CDS       T00758                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
afe  Acidithiobacillus ferrooxidans ATCC 53993
Brite
KEGG Orthology (KO) [BR:afe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:afe02048]
    Lferr_2413
Enzymes [BR:afe01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Lferr_2413
Prokaryotic defense system [BR:afe02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Lferr_2413
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII CENP-O DUF1759 Phage_rep_org_N AAA_22
Other DBs
NCBI-ProteinID: ACH84609
LinkDB
Position
complement(2379805..2382873)
AA seq 1022 aa
MTPLNESTIEHHAIALFKELGYAYAFGPDIGPDSNQKERADYENPLLLERLRTAIHRLNP
EAPKEIRDEALRHVQAIAVGGLMTENSLFQQMLVEGVRVAHMVDGEERGSIVRLIDYDHP
EKNDLLVVNQYTVIHNRINRRADLVVFVNGLPLGLFELKNMADANATTRRAWNQLQTYQA
DIPNLMAYNAILVISDGLKAAVGCLGAPYERFLPWKTIDGQELMDRGDDPLRFLIHGVFE
PVRFLDLIRYFIAISDDGRKLSKKIAAYHQFHAAQKALLTTLASAGIGGDRRGGVVWHTQ
GSGKSLTMLFFAGMLIQHPALENPTILMLTDRTNLDTQLFDTFAAGKQLLRQDPQQADSV
SDLRELLQRASGGVLFSTIQKFQKDRDEPLGKHPVLSERKNIIVMVDEAQRSQYEILKGY
AANLRAALPNATFVAFTGTPLELDDRDTRVVFGDYIDIYDIQRAVEDGATVPIYYESRLV
RLNLPEDQRPLIDSTFEEITEDDEQENKERLKTRWAQLEALVGAPKRVEQIAADLLDHWE
KRKSILSGKAMIVAMSRRIAVELYDAIVRIHPDWRGDDDTQGRIKVVMTGSASDPIEWKP
HIRSKAGNEAIADRLKDPDDPLEIVIVRDMWLTGFDAPALNTLYVDKPMRGHTLMQAIAR
VNRVFTNKSGGLVVDYIGIAQDLKNAIATYTRSGGKGNPAETVQTAIKVLLEKLDICRGI
FHGCDYQDYLTDDGSEKVATLRKATEFILSQELTEEGVKRRFRNATSGLKKAATLAAGDD
IVERCRTEIIFFLSVRATLDKSSEAESLVEEQEYAIRQLIDQSIAPEGVVDLYAVAGLPK
SEISLLSDEFIHQIEAMPEKNLALEMLRRLLQDKVRKEGKGNLIQSKAFSEKLEEALRKY
HNRSVDTVEVMQELIELAKALQALDQRHAELGLSKDEAAFYDALATNDSAVQAMGDEALK
MIAKEVADTVRQNTRIDWSIREQARAHLRRMVKRVLRKHGYPPDMQEGAVNLVIEQAEGL
VG
NT seq 3069 nt   +upstreamnt  +downstreamnt
atgacccccctcaacgaatccaccatcgaacaccacgccattgccctattcaaagaactg
ggctacgcctacgcattcggccccgacatcggcccggatagcaaccaaaaagaacgcgct
gactacgaaaaccccctgttactggaacgcctgcgtacagccatccatcgcctgaatcca
gaagcccccaaggaaatccgcgacgaagccctacgccatgtgcaggctattgccgtgggt
ggactgatgaccgagaacagcctatttcagcagatgctcgtggaaggggtacgggtggcg
cacatggtggacggcgaagaacgcggcagcatcgtccgcctgatcgactacgaccatcct
gaaaagaatgatttgctggtggtcaaccagtacaccgtcatccacaaccgcatcaaccgc
cgcgccgatctagtggttttcgtgaatggcctgcccttgggcctctttgaactgaaaaac
atggcggacgccaacgccaccacccgccgggcatggaatcaactacagacctatcaggcc
gacattcccaacctcatggcctacaacgccatactggtcatcagcgatgggctgaaggcc
gccgtaggctgtctgggtgccccttatgaacgctttctgccctggaaaaccatcgacggt
caggaactcatggaccggggggatgaccctttacgtttcctgattcacggggtttttgaa
cccgtccgttttctggacttgatccgctatttcatcgccattagtgacgatggccgcaaa
ctcagcaagaagatcgccgcctatcatcagttccacgccgcccagaaggccctgctgacc
accctggcatcggcaggcatcggtggtgatcgccggggtggtgtggtctggcatacccag
gggtccggcaagagcctcaccatgctctttttcgcgggcatgctcatccagcacccggcg
ctggaaaaccccaccatcctcatgctcaccgaccgcacgaacctggacacccagttgttc
gatacctttgccgcaggcaagcagcttttacggcaagacccgcagcaggccgacagcgtc
agtgatcttcgggaactgctgcaacgggcttccggcggtgtactgttcagcaccatccag
aaattccagaaagaccgcgacgaacctttgggcaagcacccggtattgtccgagcggaag
aacatcatcgtcatggtggatgaagcccagcgtagccagtatgagattctgaagggatat
gccgccaatctgcgggcggccttgcccaacgcgaccttcgtggccttcaccggcacaccg
ctggaactggatgaccgggacacgcgggtggtgttcggcgattacatcgacatctacgat
attcagcgggccgtcgaggatggggccaccgtcccgatttattacgaaagccgcctggtg
cgcctcaacctgccggaagaccagcgccccctcatcgacagcacctttgaggaaatcacc
gaagacgacgagcaggaaaacaaggaacgcctgaaaacccgctgggcgcaactggaagcc
ctggtcggcgcccccaagcgagtggaacagattgccgctgacctgctggaccattgggaa
aagcgcaagagcatcctgtccggcaaggccatgatcgtcgccatgagccgtcgcattgcc
gtggaactttatgatgccatcgtccgtatccatcccgactggcgcggtgacgacgacacg
caaggccggatcaaggtggtcatgaccggttccgccagcgaccccatcgaatggaagccg
catatccgcagcaaggcgggcaatgaagccattgccgaccgcctgaaagacccggatgat
ccgttagaaatcgtcatcgtgcgggatatgtggctgacgggcttcgacgccccggccctg
aatacgctctatgtggacaaacccatgcgcgggcacaccctcatgcaggccatcgcccgc
gtcaaccgggtcttcaccaacaagtccggtggactggtggtggattacatcggcattgcc
caggacctgaaaaacgccattgccacctacacccgttccggtggcaagggcaatccggcg
gaaaccgtgcagaccgccatcaaggtgctgctggaaaaactcgacatctgccgcggtatt
ttccatggctgtgactatcaggattatctgactgacgacggatcagaaaaggtggccacc
ctgcgcaaggccaccgaattcattctgtctcaggaactcaccgaagaaggcgtcaagcgc
cgtttccgcaacgccacgtccggcctcaaaaaagcggcgactttagccgccggcgacgac
attgtggaacgctgccggactgagatcattttcttcctgagcgtccgtgccactctggac
aagtccagcgaggccgagtctctggtggaagaacaggaatacgccatccgccaacttatc
gaccaatccatcgccccggaaggcgtggtggacctgtatgcggtggcggggctacccaaa
agcgaaatatccctgctgtccgatgaattcatccaccagatcgaggctatgcccgaaaag
aatctggcgctggaaatgctgcgtcgattactgcaggacaaggtccgcaaggaaggcaag
ggcaacctgatccagagcaaagccttctcggaaaagctggaagaagccctgcgcaaatac
cacaaccgttcggtggataccgtcgaggtgatgcaggaactcatcgaactggccaaagca
ttacaggcgctggatcaacgccatgcggaactgggcctcagcaaggacgaggccgccttt
tatgatgccctggcgaccaacgattccgccgtgcaggccatgggggacgaggccctgaaa
atgatcgccaaggaagtggccgatactgtgcgccaaaacacccgcatcgactggtccatc
cgggaacaggcaagggcgcatctgcggcgcatggtgaagcgggtgctacgcaaacacggc
tatccacccgacatgcaggaaggggcggtgaatctggtcattgaacaggctgaggggttg
gtggggtga

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