KEGG   Acidithiobacillus ferrooxidans ATCC 53993: Lferr_2477
Entry
Lferr_2477        CDS       T00758                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
afe  Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe02024  Quorum sensing
afe03060  Protein export
afe03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:afe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Lferr_2477
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Lferr_2477
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Lferr_2477
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:afe02044]
    Lferr_2477
Enzymes [BR:afe01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Lferr_2477
Secretion system [BR:afe02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Lferr_2477
  Eukaryotic Sec-SRP protein
   Lferr_2477
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 Zeta_toxin ArsA_ATPase cobW AAA_31 AAA_33 nSTAND3 DUF2927 AAA_24 ATPase APS_kinase ResIII AAA_18 YqeC ParA SWI2_SNF2 KTI12 DnaB_C T2SSE Thymidylate_kin AAA_28
Other DBs
NCBI-ProteinID: ACH84672
LinkDB
Position
complement(2442154..2443530)
AA seq 458 aa
MFDNLTQKLTQTFKNLRGQGRLSEDNIRDALRDVRLALLEADVALPVVKDFINNVRESAM
GEAVVKSLTPGQVFVKIVHDELVQLMGAHNDSLDLSARPPAVILLAGLQGSGKTTTSAKL
ALWLKDKEKKRVLMVSTDVYRPAAMEQLVHLGKDIEVDVFPSSPGQQPVRIAQDAVEAAQ
RGVYDVLIVDTAGRLHVDGEMMAEAQALTAAVKPVELLFVVDAMTGQDAVNTAKAFNDAL
PLTGVILTKADGDARGGAALSVRAITGKPIKFIGIGEKIRKGLEPFYPERMASRILGMGD
IVSLVEQVQQDVDEDQARKMTQKLRSGKGFDLEDFREQLRQLERMGGMASIMDKLPGMGE
LSAEAQSAMQDGKPMRRLEAIINSMTPGERHHPDIIKASRRRRIAAGSGTTVTEVNKLLK
QFEMMQKMFKKMGKGGRGLSRLLGMNPKSMLKGGLPFR
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgtttgacaatctgacccagaaactgacccagactttcaagaatctgcgcggccaggga
cggctgagcgaggacaacatccgtgacgccctgcgcgacgtgcgcctggcgctgctggag
gcggatgttgccctgccggtggtcaaggactttatcaacaacgtgcgcgaatcggccatg
ggcgaagccgtggtcaaaagcctcacgccggggcaagtcttcgtcaagatcgtccacgac
gaactggtacagttgatgggcgcgcataacgacagtctcgatctcagcgcccgtcccccg
gcggtgattctcctcgcgggtttgcagggttcgggtaagactaccactagtgccaagctc
gccctgtggctcaaggacaaggaaaagaagcgcgtgctgatggtcagtaccgacgtctat
cgtccggccgccatggaacagttggtgcatctgggtaaggacatcgaggtggatgtattt
ccctccagccccggccagcagccggtgcgtatcgcccaggatgcggtggaggcggcgcag
cgcggcgtctatgacgtgctcatcgtcgatacggcggggcgtctgcatgtggacggcgag
atgatggcggaggcacaggcactgacggcggcggtcaagccggtggaactgctctttgtg
gtggatgccatgaccggtcaggacgcggtgaataccgccaaggcctttaatgacgctctg
ccgctgaccggcgtgattctcaccaaggcggacggcgacgcccgcggtggcgcggctcta
tcggtgcgagccattaccggcaagcccatcaagttcatcggtatcggtgagaaaattcgc
aagggtctggaaccgttttatcccgagcgcatggcctcgcgcattctggggatgggtgac
atcgtcagtttggtggagcaggtccagcaggatgtggatgaggatcaggcccggaaaatg
acccagaagttgcgcagcggcaagggcttcgatctggaagacttccgtgagcagttgcgt
cagctcgagcgcatgggcggtatggccagcatcatggacaagctgccgggtatgggtgag
ttgtccgccgaggcgcagagcgcgatgcaggatggcaagcccatgcgccgcctggaagcc
atcatcaactctatgacgcccggcgaaagacatcatccggacatcatcaaggcctcgcga
cggcggcggattgctgcgggttccgggacgaccgtgaccgaagtgaacaagctcctaaag
cagttcgaaatgatgcaaaagatgttcaaaaaaatgggtaaagggggccggggactcagc
cgtttgctggggatgaatcccaaatccatgctgaagggcggtttacccttccgttag

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