Acidithiobacillus ferrooxidans ATCC 53993: Lferr_2538
Help
Entry
Lferr_2538 CDS
T00758
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe00550
Peptidoglycan biosynthesis
afe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Lferr_2538
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afe01002
]
Lferr_2538
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
afe01011
]
Lferr_2538
Enzymes [BR:
afe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Lferr_2538
Peptidases and inhibitors [BR:
afe01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Lferr_2538
Peptidoglycan biosynthesis and degradation proteins [BR:
afe01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Lferr_2538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ACH84732
LinkDB
All DBs
Position
complement(2503674..2504921)
Genome browser
AA seq
415 aa
AA seq
DB search
MPTGNFSLSGGFQPSIIRRIEEPPKTMKSPNILALVALLVWGGANAATPDLPPLPTLPPP
PPMPAPQLTGIQGAVLLDVNSGQVLVAENAEKPLNPSGLVKLMTAYVMYQAEKQGLVPPQ
RPVHVSNEAWHAQGSRMFIQPHLPVTMTQLEHGLLIDGGNDAAVAIAQTVAGSVGGFVDL
MNHDAAAMGLQHTHFTNPDGLPQPGQTSTALDIARLSKRLIQAYPHVLQVAGKVSYTYNH
ITQYNYNPLAGQENINGLGVGLAAKNSWNLDVSATRGGRTLVAVVLGAPSRSAAGSDASA
LLDYGWNGWQNLPLYKAGQVVAQIRHVDWSPEVVEGVTTRAVVVSEPKQQQGVRLNTRFI
PAAGLKAPIRAGAPIGTLSVRWHGRILQSVPVVARSDVQPAGWFTRLLHEGESWL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgggaacttttccctgtcagggggtttccaacccagtattatccgccggatt
gaagaaccgccaaaaacaatgaaatcgccaaacattctggccctcgtggcgctgcttgtg
tgggggggtgccaacgcggcgaccccggatttacccccattgccaaccctgcccccgcca
ccacccatgccggcgccacaactgacgggcatacagggcgcggtcctcctggatgtgaac
agcggtcaggtactggtggcggagaacgccgaaaaacccctcaacccttccgggctggtc
aagttgatgacggcctacgtcatgtatcaggcggaaaagcagggactggtgccgccgcag
cggccggttcatgtctccaacgaggcctggcatgcgcagggttcgcgcatgtttattcaa
ccccacctgccggtgaccatgacccaactggagcatggcctgttgattgacggggggaat
gatgcggctgtcgccatcgctcaaacggtggccggcagcgtcggtggtttcgtcgatctg
atgaatcatgatgcggcggcgatggggctgcaacacacccactttaccaaccccgatggc
ttgccccagccgggccagacgagtacagcgctggacatcgcgcgactctcgaaacgcttg
atccaggcgtatccgcacgtgttacaggtggcggggaaggtctcttacacttacaaccat
atcacccagtacaactacaacccgcttgccggtcaggaaaacatcaatggtctgggtgtc
ggcctggcggcaaagaacagttggaatctggatgtcagcgcgacccgcggcggacgcacc
ctggtggccgtcgtgctgggggcgccttcacgcagtgcggcgggcagtgatgcgagcgcg
ctgctggattacggctggaacggctggcagaatcttccgttgtataaggccggacaggtg
gtcgcgcaaatccgtcatgtggactggagtccggaagtggtggagggggtgaccacccgc
gccgtcgtggtgtctgaacccaaacagcaacagggtgtcaggctgaacacgcggtttatt
cccgccgccggtctcaaggcgccgattcgcgccggtgcacccatcggtaccctgtctgtc
cgttggcacggccgtatcctgcagagtgtgccggtggttgcacggagcgacgtgcagccg
gcgggatggttcacccgcctgttacacgaaggagaatcctggctgtga
DBGET
integrated database retrieval system
