Acidithiobacillus ferrooxidans ATCC 53993: Lferr_2568
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Entry
Lferr_2568 CDS
T00758
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe02020
Two-component system
afe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Lferr_2568
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Lferr_2568
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
afe02022
]
Lferr_2568
Two-component system [BR:
afe02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
Lferr_2568
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA_16
HTH_8
Mg_chelatase
AAA
Parvo_NS1
HTH_29
UPF0175
AAA_19
AAA_30
FleQ
AAA_22
NB-ARC
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ACH84762
LinkDB
All DBs
Position
complement(2539149..2540522)
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AA seq
457 aa
AA seq
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MEKGRILLVDDDADLLRLLSLRMKAAGYVVSTAASGSEALSVLAMEHPSLVITDLKMDEM
DGMALLDAIRRDYPTLPVIILTAHGSIPDALLAADQGVFAFLTKPFDGKDLMAQVERAFN
LTAAVPPSSGKKGRDSSWDRILTRSPKMQTVLDQARLVAASDASVFIHGASGTGKELLAQ
AIHQASPRHGHAFIAVNCAAFPEQLLESELFGHKKGAFTGAASSHQGLFQAAEGGTLFLD
EIGDMPLPLQVKLLRALQERMIRPVGATESIAVDVRIISASHRDLEQEMAARRFRDDLYY
RLCVVTLELPALAERPEDIPLLAEFFLRDAAAKNRKDVRGIAPEAMELLVSAPWPGNVRQ
LANVIEQAVVLSTTPRIGAPLIRHALRDREGEVMPLADAKGRFEMNYLIQIMRMTRGNVS
QAAQLAQRNRTEFYRLLHRYHLDPAAFKEAGGEAEEE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggcagaatcttactcgtggatgatgacgccgatctcctgcgtctgttgtcc
ctgcgcatgaaggcggccggctatgtggtcagcaccgcggccagcggcagcgaagcgttg
tcggtactggcgatggagcacccgtccctggtcatcaccgatctcaagatggatgagatg
gacggtatggcgctgctggacgccattcgccgcgactacccgacgttgcccgtcatcatc
cttaccgcccacggttccatccccgatgccctgctggccgctgaccagggtgtctttgcc
ttcctcaccaagccttttgatggcaaggatctgatggcgcaggtggagcgtgccttcaac
ctgacggcggcggttcccccttcttcgggcaagaagggccgggactccagttgggaccgg
atcctgacccgcagccccaaaatgcagacggtgctggatcaggcgcgtctggtggcggca
tccgatgccagcgtcttcattcatggcgccagtggtaccggtaaggaactgctggcccag
gccatccatcaggcgagtccgcgccatggccacgcctttattgccgtcaactgcgcggcc
tttcccgagcaactgctggagtcggaactcttcgggcacaaaaagggcgccttcaccgga
gcggccagcagtcatcagggcctgttccaggcggcggagggcggcacgctttttctggac
gaaattggcgatatgcctctcccgttacaggtcaaactgctgcgcgccctgcaggaacgg
atgattcgtccggtcggcgccaccgagagcatcgccgtcgacgtgcggatcatctccgcc
agtcaccgggatttggagcaggagatggctgcccggcgtttccgggatgatctctactat
cgcctttgcgtggtgaccctggaacttcccgccctggcggagcgcccggaggatatcccg
ctgctggccgagtttttcctgcgagatgcggcggccaagaatcgcaaggacgttcgcggg
atcgcgccggaagccatggaactgctcgtatcggcgccctggccgggcaatgtccggcag
ctcgccaacgtcatcgaacaggcggtggtgctgtccactaccccgcgaatcggggcgccc
ctcatccgtcatgccttgcgtgaccgggaaggggaggtcatgcctctggccgatgccaag
ggccgtttcgagatgaattatctgatccagatcatgcgcatgacccgcggcaacgtgagt
caggccgcacaactcgcacagcgcaaccgcaccgagttttatcgcctcctgcaccgctac
cacctcgatcccgccgccttcaaggaagccggtggtgaagcggaggaggagtag
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