Acidithiobacillus ferrooxidans ATCC 53993: Lferr_2699
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Entry
Lferr_2699 CDS
T00758
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe03420
Nucleotide excision repair
afe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Lferr_2699
03430 Mismatch repair
Lferr_2699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afe03400
]
Lferr_2699
Enzymes [BR:
afe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Lferr_2699
DNA repair and recombination proteins [BR:
afe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Lferr_2699
MMR (mismatch excision repair)
Other MMR factors
Lferr_2699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACH84892
LinkDB
All DBs
Position
complement(2685499..2687628)
Genome browser
AA seq
709 aa
AA seq
DB search
MSEWSALNPRQMEAVTLPSGPALVLAGAGSGKTRVLTSRIAHLLEGDVYPGAILAVTFTN
KAARAMRGRLDGMVAMDLRALWMGTFHGIAHRLLRMHHEVLGLPADFQVLDADDSQRLLR
RIMREAQMDEKQWPPRAMAGRIGRWKDEGWGPEQVQQYEGPAAAPFIPIYSAYEAAKKRS
GLVDFGDLLLYALRLWESPEILDHYQRRFQHILVDEFQDTNAVQYAWLKGLARHGQIFAV
GDDDQSIYAWRGARVENLLRFGEDFAGARVVRLEQNYRSTAPILQAANAIIAHNSDRLGK
TLWTAEPGGESIQLYTAYNEFDEARYVVGRVQQWLDDGGRRADCAILYRSNAQSRAFEEV
LVREGMPYRVYGGLRFFERAEIKDTLAYLRLTANRHDDASFERVVNVPARGIGAVSVERL
RNLARERGLSLWQAAGELGQPKISAFLNLVDDLAARTAEADLGERVEMVLAHTGLREWHG
REGDRAEGRLENLDELINAARGYAQDWSADPNLGDLAPQPGNMLSEFLTHAALEAGDGAG
DAWEDCVQLMSLHSAKGLEFPLVFLVGLEEGLFPHQRSLEDPQGLAEERRLCYVGMTRAM
RLLVISHAESRRLHGSERMTIPSRFLREIPRELLRELRPRARVSRPAMPVRVQAPEMPYP
LGARLQHPVFGEGMVLDYEAGGRQGRIQVQFASGSKWLALGVVALERLP
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaatggtctgctctcaatccccgccagatggaggcggtgaccctgccgtctggt
ccggcgctggtgctggcgggggcaggatcgggaaaaacgcgggtgctgaccagtcgtatc
gcccatttgctggaaggggacgtataccctggcgcaattcttgccgtgaccttcaccaac
aaggcggcacgcgctatgcgcgggcgattggatggcatggtggccatggacttgcgggcc
ttgtggatgggcaccttccacggcatcgcccaccgtctgttgcgcatgcatcacgaagtg
ctgggcctgcccgcagactttcaggtcctggatgccgacgatagccagcgtctgctgcgg
cggatcatgcgtgaagcgcagatggatgagaagcagtggccgccgcgcgccatggccggg
cgtatcggccgctggaaagacgagggttgggggccggagcaggtacaacaatatgaaggt
ccggcagccgcgcccttcattcccatctacagcgcctatgaagcggctaaaaagcgctcc
gggctggtggacttcggtgatctgttgctctacgccctgcgtctctgggaatcgccggaa
atcctcgatcattatcagcgccgttttcagcatattctggtggatgagtttcaggacacc
aacgcggtgcagtacgcttggctgaaggggctggctcggcatgggcagatttttgcggtc
ggcgacgatgaccagtccatttatgcctggcgaggcgcacgagtggagaatctgctccgc
ttcggcgaagactttgccggggcgcgggtggtgcgcctggagcagaactaccgttctacg
gcacccatcctgcaggcggcgaatgccattatcgcccacaattccgatcgcctcggcaaa
accctgtggacggcggaaccgggcggtgaatccattcaactctacaccgcctacaacgaa
tttgacgaggcgcgctacgtggtgggccgcgttcagcaatggctggacgatggtgggcgg
cgtgcggactgcgccatcctctaccgctccaatgcccagtcgcgggcctttgaagaagtg
ctggtgcgtgaagggatgccctatcgggtctatggtggcctgcgctttttcgagcgagcg
gagattaaggatactctggcctatctacgccttaccgccaaccgccacgatgatgcgtct
ttcgaacgggtggtgaacgtgccggcgcggggcattggtgcggtcagtgtcgagcgtctg
cggaatctggcccgcgagcgcggcctctcgctctggcaggccgccggcgaactcggtcag
ccgaaaatcagcgcgttcctcaatctggtggatgatcttgccgcacgaacggcggaggcg
gatctcggcgagcgggtggagatggtactggcccacaccggcctacgtgaatggcacggc
cgcgagggcgaccgcgccgaaggccgcctggagaatctggatgaactgatcaatgcggca
cgcggctatgcccaggactggtccgccgaccccaatctcggtgatcttgcgccgcaaccg
gggaatatgctctcggagttcctgacccatgctgccctggaagccggggatggtgccgga
gacgcctgggaggactgtgtacagttgatgagcctgcacagcgccaagggtctggagttc
ccgctggtgtttctggtggggctggaagaggggctgtttccccatcagcgctctctggaa
gacccccaggggctggctgaggaacggcgcctgtgttacgtcggcatgacccgggccatg
cgcctgctggtcatcagccatgccgagagccgccgcctgcacggcagtgagcggatgacc
ataccctcgcgctttctgcgggagattccccgggaactgctgcgggagctgaggccacgg
gcacgggtcagccgacctgctatgccagtgcgagtacaggcaccggaaatgccctatccc
ctgggggcgcgcctccagcacccggtctttggtgagggaatggtgctggattacgaggct
ggcggccgccagggccggattcaggtgcagtttgcctcgggaagcaaatggctggcgctg
ggggtggtggctttggagcggttaccttaa
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