Acidithiobacillus ferruginosus: HF292_002505
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Entry
HF292_002505 CDS
T11768
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
afer Acidithiobacillus ferruginosus
Pathway
afer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
afer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HF292_002505 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afer03021
]
HF292_002505 (rpoA)
03400 DNA repair and recombination proteins [BR:
afer03400
]
HF292_002505 (rpoA)
Enzymes [BR:
afer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HF292_002505 (rpoA)
Transcription machinery [BR:
afer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HF292_002505 (rpoA)
DNA repair and recombination proteins [BR:
afer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HF292_002505 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
XRP73538
UniProt:
A0ACD5IJ40
LinkDB
All DBs
Position
463609..464628
Genome browser
AA seq
339 aa
AA seq
DB search
MTEVGELLRPQGVDVEVISARRARMALGPLERGFGHTLGSGLRRVLLSSLKGAAVTEVEI
EGVLHEYSSIEGVQEDVVDILLNLKMLAVRAHGRGDAVVTLRKRGPGQMTGADIISEHGI
EVANPEQVIATLTRDVELVLRLRIDEGRGYDAAATRRQSHEKRIGVMALDASFSPVLRVS
YLVENARVEQRTDLDRLILDVETNGVVDPVWAVQEAARIFRSQLGVLAGAETREIPEASQ
VQVSQSLTPLLIRPVDDLELTVRSANCLKAEDIFYIGDLVQKSEQELLKAPNLGRKSLNE
IKEVLVAHGLTLGMRLDSWPPENLPPVPGRAADTDSIIG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggttggagagctgttgcgcccgcagggcgttgacgtggaagtgatttcagca
cgccgtgcgcgtatggccctggggcccttggagcgtggttttggccacactctgggtagt
gggttgcgccgggtgttgttgtcgtctctcaaaggtgcggcggttaccgaggtggagatt
gaaggggtgttgcacgagtactccagcatcgagggcgtgcaggaagacgtggtggatatc
ctgctcaacttgaaaatgctggcggtacgggcgcacggacgcggagatgcggtggttaca
ctgcgcaagcgtggccccggccaaatgaccggcgccgatatcatatcggaacatggtatc
gaagtggcgaatccggagcaggtaatcgcgacgctgacccgcgatgtcgaactggtgctc
cgtttgcgtattgacgaaggacgcggctatgacgcggctgctacgcgacgccagtcgcat
gagaagcgtatcggtgtgatggctctggatgcgagttttagtccggtgctgcgggtgagc
tatctggtggaaaacgcccgggtagagcaacgtaccgacctggatcgtctcatactggat
gtcgaaaccaatggtgtggtggatccggtctgggcggtgcaggaggcagcccgcattttt
cgcagtcagcttggcgtgctggcgggtgcggaaacccgggaaatacccgaggcatcgcaa
gtgcaggtcagtcagagccttacgcccctgttgattcgtccggtcgatgatctggaactc
acggtgcggtcggcgaactgcttgaaagccgaggatattttttatatcggcgatttagtg
cagaaatcggagcaggaacttttaaaggcgcctaatctgggacgcaagtcgctcaatgag
ataaaggaagttttggtggcgcatggcctgacgttggggatgcgactcgacagctggccg
ccggaaaatctgccgccggtgcccgggcgggcggccgatacggactcgatcatcggctaa
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