Acidithiobacillus ferruginosus: HF292_002710
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Entry
HF292_002710 CDS
T11768
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
afer Acidithiobacillus ferruginosus
Pathway
afer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF292_002710 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afer03019
]
HF292_002710 (pnp)
03016 Transfer RNA biogenesis [BR:
afer03016
]
HF292_002710 (pnp)
Enzymes [BR:
afer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HF292_002710 (pnp)
Messenger RNA biogenesis [BR:
afer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HF292_002710 (pnp)
Transfer RNA biogenesis [BR:
afer03016
]
Prokaryotic type
tRNA degradation factors
HF292_002710 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
S1_TP0910
OB_PDCD11
aRib
Motif
Other DBs
NCBI-ProteinID:
XRP73571
UniProt:
A0ACD5IP22
LinkDB
All DBs
Position
503022..505100
Genome browser
AA seq
692 aa
AA seq
DB search
MTTIRKEVDFGGRRLQLETGRMARQADGAVLVSSGDTVVLVTAVGRREMKPGQDFFPLTV
NYQEKAYAAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVIATVVSVD
RDNDPDILALVGASAALAVSGIPFNGPIGAARVAYIDGQYVLNPSYAQLTTSQLDLVVAG
TRHAVLMVESEAQQLSEEIMLEAVMFGHAQFQPVIETIEALAREAGKPRWEWVAPVADEA
LGVQVREKATPLLQEAYALTEKQARSKRLEDVQQAMATEFGSDDAGRGDMVRGLLKKIET
GIVRGRILDGAPRIDGRDSKTVRPITIEAGVLPRTHGSALFTRGETQALVVATLGTKGDE
QIIDALQGESRDRFMLHYNFPPFSTGETGMVGSPKRREIGHGRLAKRAIAAVLPTDSEFP
YSLRVVSEVLESNGSSSMATVCGASLALMDAGVPLKAPVAGVAMGLIKEGARFAVLTDIL
GDEDHLGDMDFKVAGTEQGVTALQMDIKIDGITREIMAQALKQALAGRLHILGLMNGVLA
KGRGELSDYAPRIITIQINPDRIRDVIGPGGKVIRALTEETGATIDIQDNGTVTIASVDG
EAGAAAKRRIELLTADVQVDTIYDGKVAKIMDFGAFVTILPGRDGLLHISQISNERVSDV
HDHLKEGQAVRVKVLEVDRQGKIKLSMKDIPQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
ttgaccacgatccggaaagaagtagattttggcggccgccgcctgcaactggagacgggc
cgcatggcgcgtcaggcggacggtgcggtgctggtttccagcggagacacggtcgttctg
gtgacggcagtgggccgccgggagatgaagccgggccaggatttctttccgctgacggtc
aattatcaggagaaggcctacgcggcgggcaaaattcccggtggtttcttcaagcgggaa
gggcgacccacggaaaaggagacgctgacgtcgcgtctgatcgatcgtcctatccggccg
ctctttcccaagggcttcatgaacgaagtgcaggttatcgctacggtggtgtcggtggat
cgggataacgatcccgatattctggcactggtgggtgcctcggcggcactggcggtttcc
ggcattccgttcaatggcccgattggcgcggcccgggtggcttacatcgacgggcaatat
gtgctcaaccccagttacgcacaactgaccacttcgcaactggatcttgtggtggcagga
acccggcacgccgtactcatggtcgagtccgaggcgcagcagttgtccgaagagatcatg
ctggaagcggtgatgttcggtcacgcgcagttccagcccgtcatcgaaaccatcgaagcg
ctggcacgggaggccggcaagccgcgctgggagtgggtggcgccggtggccgatgaagct
ctgggtgtgcaggtgcgcgagaaagccacaccgcttctgcaggaagcctatgcgctgacg
gagaagcaggcgcgcagcaagcggctggaagatgtgcagcaggccatggcgaccgaattt
ggcagtgacgatgcgggacgcggagacatggttcgcggactgttgaaaaaaattgaaacc
ggcatcgtgcgtggacgtattctggatggcgcgccccgcatcgatggccgggacagcaag
acggtgcggcccatcaccatcgaggcgggcgtgttgccgcggacccatggttcggcgctc
ttcacccggggggaaacccaggcgttggtggtggcgactttgggtaccaagggcgacgag
cagatcatcgatgccctgcagggtgaaagccgtgaccgctttatgctgcattacaacttc
ccccccttctccaccggtgaaacgggtatggtgggttcgcccaagcgccgggagatcggg
cacgggcgtctggcgaagcgggcgatagcggcggtcctgccgaccgacagcgaattcccg
tacagcctacgggttgtttctgaagtactggagtccaatggctcttccagtatggcgacg
gtctgtggcgcctccctggcactgatggacgcgggcgtacccctcaaagcgccggtggcg
ggcgtggccatgggcctcatcaaggaaggagcgcgttttgccgtcctcaccgacatcctg
ggtgatgaagatcatctgggcgatatggatttcaaggtggcgggcaccgaacaaggggtg
accgccctgcagatggatatcaagatcgacgggattacccgggaaatcatggcgcaggcg
ctcaagcaggcactggcggggcggctgcatatcctcggcctgatgaatggcgtgctggct
aagggccgtggcgagttgtccgactacgcaccgcgcatcatcaccatccagatcaatccg
gatcgcatccgcgacgtcatcggaccgggcggtaaagtcatccgcgccctgaccgaagaa
accggcgcgaccatcgatatccaggacaacggcacggtaaccatcgcctcggtggacggt
gaagcgggcgccgccgcgaagcgacgtatcgagttgctgacggcggatgtgcaggtcgat
accatttacgacggaaaagtggccaagatcatggattttggcgcctttgtgacgattctg
ccgggacgcgacggtctgctgcacatttcccagatcagcaacgaacgggtcagcgatgtc
cacgatcatctcaaggaagggcaggcggtgcgtgtcaaggttctggaagtggatcgccag
ggcaagatcaagctgagcatgaaggatattccgcaataa
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