Acidithiobacillus ferruginosus: HF292_002940
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Entry
HF292_002940 CDS
T11768
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
afer Acidithiobacillus ferruginosus
Pathway
afer00521
Streptomycin biosynthesis
afer00523
Polyketide sugar unit biosynthesis
afer00525
Acarbose and validamycin biosynthesis
afer00541
Biosynthesis of various nucleotide sugars
afer01100
Metabolic pathways
afer01110
Biosynthesis of secondary metabolites
afer01250
Biosynthesis of nucleotide sugars
Module
afer_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
afer00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HF292_002940 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HF292_002940 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HF292_002940 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HF292_002940 (rfbB)
00525 Acarbose and validamycin biosynthesis
HF292_002940 (rfbB)
Enzymes [BR:
afer01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HF292_002940 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
adh_short
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
XRP73616
UniProt:
A0ACD5IP87
LinkDB
All DBs
Position
complement(543471..544610)
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AA seq
379 aa
AA seq
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MSVTTDSIVEKRLLVTGAAGFIGANFCHHWLQQHPRATLIALDALTYAGNRHNLEGLEQH
SGFRFVQGDINDALLVERVMTDHHLNVIVHFAAESHVDRSIHDPDAFIQTNILGTHNLLR
VARAIWLDGPQGWIPHRFHHISTDEVYGTLGPQDPAFHEETPYAPNSPYAASKAGADHLV
RAYQHTYGLSTTTSNCSNNYGPYHFPEKLIPLIIVNILHNKPLPIYGDGRQIRDWLYVED
HCRGIATILEQGQEGESYNIGGCNEWANIDIVRLIGEIMDELFAEDPRWLQAFPHSAAAQ
GRKSADLIQHVRDRPGHDRRYAIDATKITRELGFKPAVDFPTGIRQTIRWYLEHPQWWQK
IMDGSYREWLDVQYGALKA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttaccactgactccatcgtcgaaaaacgcctgctggtgaccggagctgccggc
ttcatcggcgccaacttctgccaccactggctgcagcaacatccccgcgccacgctcatt
gccctggacgccctcacctacgccggcaaccgtcataatctggaagggctggaacagcac
agtggtttccgcttcgtacagggcgacatcaatgatgccctgctggtagaacgggtcatg
accgaccatcacctcaacgtcatcgtccacttcgccgccgagagccatgtggaccgctcc
atccacgatcccgacgccttcatccagaccaacatcctcggtacccacaatctgttgcgc
gtcgccagggcgatctggctggacggaccgcaaggatggataccccaccgctttcaccat
atttccaccgatgaggtatacggcaccctcggtccgcaggatcccgcctttcacgaagag
actccttacgcccccaactccccctatgccgccagcaaggcaggggcggatcacctggtc
cgcgcctatcagcacacctacgggctcagcaccaccaccagcaactgctccaacaactat
gggccctatcactttcccgagaagctgattcccctcatcatcgtcaacatccttcacaac
aagcccctgccgatctatggcgatggccggcagatccgtgactggctctatgtggaagac
cattgccgtggtatcgcgacgatcctggaacagggacaggaaggagaaagttataacatc
ggcggctgcaacgagtgggccaacatcgacatcgtgcggctcatcggcgaaatcatggac
gaactcttcgccgaagatccgcgatggctgcaagcctttccccattcggcggcggcgcag
gggcggaaaagtgccgatctcatccagcatgtccgtgaccggcccggccatgaccgccgc
tatgccatcgacgccacgaaaatcacccgggagcttgggttcaagcccgccgtagacttc
cccaccggcatccgtcagaccatccgttggtatctggagcacccgcagtggtggcagaaa
atcatggatgggagttatcgggaatggctggatgtgcagtacggagcgctgaaagcctag
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integrated database retrieval system