Acidithiobacillus ferruginosus: HF292_004265
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Entry
HF292_004265 CDS
T11768
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
afer Acidithiobacillus ferruginosus
Pathway
afer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF292_004265 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afer03021
]
HF292_004265 (rho)
03019 Messenger RNA biogenesis [BR:
afer03019
]
HF292_004265 (rho)
Transcription machinery [BR:
afer03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HF292_004265 (rho)
Messenger RNA biogenesis [BR:
afer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HF292_004265 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
S1CSD-TOTE-2
AAA_22
OB_RNB
ATPase_2
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XRP74491
UniProt:
A0ACD5ILF0
LinkDB
All DBs
Position
810698..811954
Genome browser
AA seq
418 aa
AA seq
DB search
MNLTDLKRKTAADLAVICQDMGLEGTARQKKQEIIFNILKAHARNGDAIYGEGVLEILQD
GFGFLRAASGSYMAGPDDIYVSPSQVRRFHLQTGDTVSGQIRPPKEGERYFALLKVESIN
FEAPEATRNKVNFDDLTPLFPDERLRLEYDAVPYGEMAPRIIDLVSPIGKGQRGLIVAPP
KTGKTVLLQQIAHAITANHPECYLIVLLIDERPEEVTEMQRSVKGEVVSSTFDEPATRHT
QVAEIVLEKAKRLVEHKHDVVILLDSITRLARAFNTVVPSSGKVLTGGVDANALQKPKRF
FGAARNIEEGGSLTIIATALVETGSKMDEVIFEEFKGTGNMEVHLDRRLAEKRTYPAINL
NKSGTRREELLVPAEMLSKMWVLRKLLAPMDPVESMEFLLDKVRSTKNNAEFFDSMNR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttaccgacctcaaacgcaagacggccgctgatctggcggtgatctgccaggac
atggggttggagggtaccgcccgtcagaagaaacaggaaatcattttcaacatcctcaag
gcgcacgcgcgcaatggcgacgccatttacggtgagggcgtgctggagattctacaggat
ggtttcggctttctgcgtgctgcttccgggtcttatatggcggggccggatgacatctat
gtctcgccctcgcaggtacggcgctttcacctgcagaccggagacacggtttcgggccag
attcgccctcccaaagaaggtgaacgctatttcgcgctgctcaaggtggagagcatcaat
ttcgaagcgccggaagcaacccgcaacaaagtcaattttgacgatttgacgcctttgttc
ccggacgagcgtttgcgcctggaatacgacgcggtaccttatggcgaaatggcaccgcgg
atcatcgatctggtatcacccatcggcaagggccagcgcggtctgatcgtcgccccgccc
aaaaccggcaagacggtgttgttgcagcagattgcccacgccattaccgccaaccatccg
gaatgctatctgatcgtgttgctgatcgacgagcgtccagaagaagtgacggagatgcag
cgctcggtgaagggcgaagtggtctcttccacctttgacgaaccggcgacgcgccacacc
caggttgcggaaatcgtcctggaaaaggccaagcgcctggtggagcacaaacacgatgtg
gtcatcctgctcgactccatcacccgcctggcgcgcgccttcaacaccgtagtgccgtct
tccggcaaggtactgaccggcggcgtggatgccaacgcgctgcagaagcccaagcgcttc
tttggcgccgcacgcaacatcgaagagggtggcagcctcaccatcatcgccacggcgctg
gtggaaaccggttccaagatggacgaagtcatcttcgaagagttcaagggtacgggcaac
atggaagtacatctcgaccgtcgtctagccgagaaacgtacgtacccggccatcaacctg
aataaatccggtacccgtcgtgaagaactgctggtcccggccgagatgctcagcaaaatg
tgggtattgcgcaaattgctcgcgcccatggatccggtggaatccatggagtttctgctc
gacaaggtgcgcagcaccaaaaataacgcagagttcttcgactccatgaaccgttaa
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