Alysiella filiformis: H3L97_00625
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Entry
H3L97_00625 CDS
T06725
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aff
Alysiella filiformis
Pathway
aff03420
Nucleotide excision repair
aff03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H3L97_00625
03430 Mismatch repair
H3L97_00625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aff03400
]
H3L97_00625
Enzymes [BR:
aff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H3L97_00625
DNA repair and recombination proteins [BR:
aff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3L97_00625
MMR (mismatch excision repair)
Other MMR factors
H3L97_00625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
YmfE
DUF3553
ResIII
Motif
Other DBs
NCBI-ProteinID:
QMT31454
LinkDB
All DBs
Position
complement(106011..108215)
Genome browser
AA seq
734 aa
AA seq
DB search
MFFQDSNPDLFRNLNTQQRQAVECNPQTSALILAGAGSGKTRVLTTRIAWLLQHAHAGVH
NIMAVTFTNKAAKEMQTRLSAMLPHNLRAMWLGTFHGICHRLLRLHYRDANLPQTFQILD
SSDQTAIIKRLLKQMDIDEKVLAPRVLQGFINAQKEAGLRSGSLDAPDPYTQRLIRCYAE
YEQLCQREGVVDFAELLLRSYELLNANATLLAHYHSRFTHILVDEFQDTNNLQYAWLKLL
AGGGAAVFAVGDDDQSIYRFRGANVGNMAQFLRDFGVSEPIKLEQNYRSVGNILTAANAV
IQNNSDRLGKNLRTDAPDGDKIRVFSAFNDLVEAEFIVSEIKMLQREGHDLNQIALLYRS
NAQSRVLEQALFQAAVPYKIYGGLRFYERQEVKHALAYLRLAINPDDDNALLRVINFPPR
GIGTRTIENIQAAAQTSGTTLFQAACTMGKKTAPFIDLIEQLRGQVGVVSLPELVQSVLD
LSGLITHYQNQKQIAEQERVENLHELLNAATYFRVEDVQLDTLPENLADHAALPIIAFLS
NAALESGENQAGKGDSAVQMMTVHAAKGLEFDVVFLSGMEEGRFPSELSLNEAGGLAEER
RLMYVAITRARQRLYVSMAQQRMLHGVSQFGVPSRFVDELPENVLQHLSPKPKSKNSQEN
SHLKFHQHAPAVSNQELPRDFDGFLIGENVRHGKFGVGVIIDAVDGGSSAKLTINFGVDG
IKVLDTAFAKLAKL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgttttttcaagattccaatcccgatttattccgcaatctcaatacgcagcaacgccaa
gccgttgaatgcaatccacaaacttccgcgctgattttggctggcgcaggcagcggcaaa
acgcgcgttttgaccacgcgcattgcgtggctgttgcaacacgcccacgcaggggtgcat
aacatcatggcggttacgtttaccaacaaagccgccaaagaaatgcaaacgcgcctgtct
gccatgttgccgcacaatttacgcgccatgtggttggggacgtttcatggcatttgccac
cgtctgttgcgtttgcattaccgcgatgcgaatttgccgcaaacctttcaaattttggac
agcagcgaccaaaccgccatcatcaaacgccttttgaaacaaatggatattgatgagaaa
gtgcttgcaccgcgcgtgttacaaggtttcatcaacgcgcaaaaagaagcgggtttgcgt
tcaggcagccttgacgcgcccgacccctacacccaacgtctgattcgctgctatgctgaa
tatgagcagctttgtcagcgcgaaggcgtggtggattttgccgaattgctgttgcgaagt
tacgagcttttgaatgccaatgccacacttttggcgcattatcacagccgtttcacgcac
attttggtagatgaatttcaagacaccaacaatttgcaatacgcttggctcaaattgctg
gcaggcggtggcgcggcggtgtttgccgtgggcgatgatgaccagagcatttaccgtttt
cgcggtgcaaatgtgggcaatatggcgcaatttttgcgcgattttggcgtgagcgagccg
attaaattggaacaaaattaccgttcggtgggcaatattttgaccgccgccaatgccgtt
atccaaaacaacagcgaccgcttgggcaaaaatttgcgtacagacgcgcccgatggcgac
aaaattcgcgtgttttctgcattcaatgatttggtggaggcggaattcattgtttctgaa
atcaaaatgttgcaacgcgaagggcatgatttgaaccaaatcgccttgctctatcgcagc
aatgcccaatcgcgcgtgttggaacaagccctgtttcaggcagccgtgccatacaaaatt
tatggcggcttgcgcttttatgaacgccaagaagtgaaacacgcgctggcgtatttgcgt
ttggcgattaaccccgatgacgataacgctttgttgcgcgtgattaattttccgccacgc
ggcataggcacgcgcaccattgaaaacattcaggcagccgcacaaacaagcggcacaacc
ctgtttcaggcagcctgcaccatgggcaaaaaaaccgccccattcattgatttgattgaa
caattacgcggacaagtgggcgtggtttcgctgcctgaattggtgcaaagtgtgttggat
ttgtcgggtttaatcacgcattatcaaaatcaaaaacaaatcgccgaacaagagcgcgtg
gaaaacctgcacgaattgctcaacgcagcaacgtattttcgcgtggaagacgtgcaactg
gacacgctgcctgaaaatttggcagaccatgccgccttgcccatcatcgcctttttgagc
aatgcggctttggaaagcggcgaaaatcaggcaggcaaaggcgacagcgcggtgcaaatg
atgaccgttcacgcggcaaaaggtttggaatttgacgtggtgtttttgtcgggcatggaa
gaggggcgtttccccagcgaattgagtttgaacgaagcgggcggtttggcggaggaacgg
cgtttgatgtatgtggcgattacgcgggcgcgacaacggctttatgtgagcatggcgcaa
cagcgcatgttgcatggcgtttcgcaatttggcgtgccatctcgttttgtggacgagctg
cctgaaaacgtgttgcaacatttatcgcccaaaccaaaatccaaaaacagccaagaaaac
agccatttaaaatttcatcaacacgcgccagccgtttccaatcaagaattgccacgcgat
tttgacggctttttgattggcgaaaatgtgcgtcatggcaaatttggcgtgggcgtgatt
attgacgcggtggacggcggctcatctgccaaattgaccatcaactttggcgtagacggc
attaaggtgctggatacggcatttgccaaattggcaaaattatag
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