Alysiella filiformis: H3L97_00975
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Entry
H3L97_00975 CDS
T06725
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aff
Alysiella filiformis
Pathway
aff03030
DNA replication
aff03430
Mismatch repair
aff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H3L97_00975 (dnaE)
03430 Mismatch repair
H3L97_00975 (dnaE)
03440 Homologous recombination
H3L97_00975 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aff03032
]
H3L97_00975 (dnaE)
03400 DNA repair and recombination proteins [BR:
aff03400
]
H3L97_00975 (dnaE)
Enzymes [BR:
aff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H3L97_00975 (dnaE)
DNA replication proteins [BR:
aff03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H3L97_00975 (dnaE)
DNA repair and recombination proteins [BR:
aff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H3L97_00975 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF655
Motif
Other DBs
NCBI-ProteinID:
QMT32404
LinkDB
All DBs
Position
complement(165703..169182)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSEPIYIPLRTHSEYSITDGMVRLDELAEKAVEYQYPALALTDLMNTFGLVKFYKECRGA
GIKPILGADVRVENLAHPEQAHRALLLVRNMQGYVRLSELLTAAYEADDRHLHLPQLRET
WLEQGDNSGLICLSGAHWGEVGSQILLGHDAAAQAAAQKYAKWFPNAFYLELQRLPEKPD
THKCVSGSLKLAAALDLPVVATHPTQFLSRDDFMAHDTRVCIAGGWTLADTKRPKEFFAS
QYFISPEEMQQRFADIPEALANSVQIAKRCNVELVLGKNFLPDFPTPNNMPIDEYIVQLS
NEGLQARLKTLFPNEAERAIRQPEYQERLDFELKTIIQMGFSGYFLIVQDFINWAKNNGC
PVGPGRGSGAGSLVAYALKITDLDPIKYALLFERFLNPERVSMPDFDIDFCQANRGRVIE
YVREKYGKDAVSQIVTFGTLSSKAVIRDVGRVLQLPFSLCDRLSKLVPVVQNKPLALKAA
LAAEPEIERIIAEEEAEELLNLALKLENLTRNLGMHAGGVLIAPGKISDFCGVYQADESS
SPVSMYDKGDVEEVGLVKFDFLGLRNLTIIEMAQNFIKQTTGKIIDVNDVNVAPLDDQKA
YQIFRDANTTAVFQFESTGMKKMLKEAHTTQFEELIAFVSLYRPGPMANIPDFVARMKGE
AFEYLHPLLESVLLPTYGIMVYQEQVMQAAQVLAGYSLGGADLLRRAMGKKKAAEMVKQR
DIFAEGAAKKGISREKADEIFDYMEKFAEYGFNKSHAAAYAYVSFQTAWLKAHYPAEFMA
ATMSSELDNTDQLKAFYDDAQSKLNKIKFLPPDVNESFYQFIPNANREIRYALGAIKGTG
EAAVNAIVAERERGGKFTSFLDFCARVGKQHANRRVLEALIRGGAFDNIEPNRAMLLGNI
DLALQHADQTASNANQGGLFDDLDGAVESVKLIELPEWSPSQKLEEEKLAIGFYLSGHPF
APYETEVRQIARTPLGRLRPTRFGNTTWVGGFVTSVRTINGKKGKFVVMQLEDTTGKQEL
LISGKLLEHVQQNARELLQADQVVVCECAIREDKLAGKEGELRLSVVQLMTLNEARILRV
NCLHILVSPQHDVDKLATLLAPHTEIKDETQKRIPIRFYYEDEQVRGEMLPAALWRIHVN
GDLLNQLTDLMGEEYVWIN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccatttacattcccctgcgcacacattccgaatattccattaccgatggc
atggtgcgcctagacgaattggcggaaaaagccgttgaatatcaatatcccgccttggct
ttaaccgatttgatgaacacctttggtttggtcaaattttacaaagaatgccgaggtgca
ggcatcaaacccattttgggtgccgatgtgcgtgtggaaaatttggctcaccccgagcaa
gcccatcgcgccttattgttggtacgcaatatgcaaggttatgtgcgcctgtcggagctg
ctcacggcggcttatgaagccgatgaccgccaccttcatctgccacaattacgcgaaaca
tggctggaacagggcgacaattcgggtttaatctgcttgtcgggcgcgcattggggcgaa
gtgggcagccaaattttgttgggacacgatgccgccgcccaagccgccgcccaaaaatac
gccaaatggtttcccaacgccttttatttggaattgcaaaggctgcctgaaaaacccgat
acccacaaatgcgtttcaggcagcctgaaattggcggcggcgttggatttgcctgtggtt
gccacgcaccccacacaatttttgtcgcgcgatgatttcatggcacacgacacgcgcgtg
tgcattgcaggcggctggacgcttgccgacaccaaacgccccaaagaattttttgccagc
caatatttcatttcgcccgaagaaatgcagcagcgttttgccgacattcccgaagccttg
gcaaacagcgtgcaaatagccaagcgttgcaatgtggaattggtgttgggcaaaaatttc
ctgcccgattttcccacgcccaataatatgcccattgacgaatacatcgtccaattatca
aacgaaggcttgcaagcgcgattgaaaaccctgtttcccaatgaagccgaacgcgccatc
aggcagcctgaataccaagaacggcttgattttgaattaaaaaccatcatacaaatgggc
ttttcaggctattttttgattgtacaagacttcatcaactgggcaaaaaacaacggttgc
cccgtagggccggggcgcggttcaggcgcaggttcactggtggcatacgccttaaaaatc
acagatttagaccccatcaaatacgcattgctgtttgaacgctttttgaaccccgagcgc
gtgtccatgcccgactttgacattgacttttgccaagccaaccgagggcgcgtgattgaa
tatgtgcgtgaaaaatatggcaaagatgccgttagccaaattgtaacctttggtacttta
tcgtccaaagccgtgatacgcgatgtagggcgcgtgttgcagttgccgttcagtttgtgc
gaccgcctttccaagctggtgcccgttgtgcaaaacaaacctttggctttaaaggcagca
ttggcagccgaacccgaaattgaacgcattattgcagaagaagaagccgaagaactgctc
aatttggcattgaaattggaaaatttgacgcgcaacttgggtatgcacgcaggtggcgtg
ttaatcgcccctggtaaaatttccgatttttgtggcgtgtatcaagccgatgaatcctca
tcgcccgtgtccatgtatgacaaaggcgatgtggaagaagtcggcttggtcaaatttgac
tttttgggtttgcgcaatttaaccatcattgaaatggcgcaaaatttcatcaaacaaacc
acaggcaaaatcattgatgtaaacgatgtcaatgttgccccacttgatgaccaaaaagcc
taccaaattttccgcgatgccaacaccaccgccgtgtttcagtttgaatccacaggcatg
aaaaaaatgctcaaagaagcgcataccacgcaatttgaagagctgattgcttttgtgtcg
ctgtatcgccccggccccatggcaaacattcccgattttgtggcgcgcatgaagggcgaa
gcatttgaatatttgcaccctttgctggaatcggtgttgttgcccacctatggcattatg
gtttatcaggaacaggtaatgcaggcagcccaagttttggcgggctactctttggggggg
gcggatttgttgcgccgcgccatgggcaagaaaaaagccgcagaaatggtcaaacagcgc
gatatttttgccgaaggtgcagccaaaaaaggcatttcacgcgaaaaagccgatgaaatt
tttgattatatggaaaaatttgccgaatacggtttcaacaaatcgcatgcggcggcttat
gcttatgtgtcgtttcaaactgcgtggcttaaagcgcattatcctgccgaatttatggcg
gcaaccatgtccagcgagttggacaacaccgaccagcttaaagcgttttacgatgatgca
caaagcaaactcaacaaaatcaaatttttaccgcctgatgtcaacgaatcgttttaccaa
ttcattcccaatgccaacagggaaatccgctacgccttgggcgcgattaaaggcacaggc
gaggcggcagtcaatgccattgtggcggaacgcgaacgcggtggcaaattcaccagtttc
ttggatttttgtgcgcgtgtgggcaaacagcatgccaatcgccgtgtgttggaagccttg
attcgcggcggtgcatttgacaatattgaacccaatcgcgccatgttgttgggcaacatt
gatttggcattgcaacacgccgaccaaaccgccagcaacgccaatcaaggcggtttgttt
gatgatttagacggtgcggtggagtcggtcaaattgattgagctgcctgaatggtcgccc
agccaaaaattggaagaggaaaagctggcaatcggcttttatttgagcggacaccccttt
gcgccctacgaaacggaagtgcgccaaattgcgcgaacgccattgggcaggctgcgtccc
acgcgatttggcaatacgacttgggttgggggctttgtcacatcggtgcgtaccatcaat
ggcaaaaaaggcaaatttgtggtcatgcaattagaagacaccacaggcaaacaggaattg
ttgattagcggcaagttgttggaacatgtgcaacaaaatgcgcgtgaactgttgcaagcc
gaccaagttgtggtgtgcgaatgcgccattcgtgaagacaaattggctggaaaagagggc
gaattgcgtttgtcggtggtgcaactgatgacgctcaatgaagcgcggattttgcgggtt
aattgtttgcacattttggtgtcgccacaacacgatgtggacaagctggcaacattgctg
gcaccgcacaccgaaatcaaagatgaaacgcaaaagcgcattcccattcgtttttattat
gaagatgagcaagtgcgtggcgaaatgctgcctgctgcattgtggcgcattcatgtgaat
ggcgatttgctcaatcaactgactgatttaatgggcgaagaatatgtgtggataaattga
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