Alysiella filiformis: H3L97_04370
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Entry
H3L97_04370 CDS
T06725
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
aff
Alysiella filiformis
Pathway
aff00541
Biosynthesis of various nucleotide sugars
aff01100
Metabolic pathways
aff01250
Biosynthesis of nucleotide sugars
Module
aff_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
aff00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
H3L97_04370 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
aff01005
]
H3L97_04370 (rfaD)
Enzymes [BR:
aff01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
H3L97_04370 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
aff01005
]
Core region
H3L97_04370 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
QMT32108
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Position
complement(890705..891709)
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AA seq
334 aa
AA seq
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MTIIVTGAAGLIGSNIVKGLNARGIRDIIAVDNLTHGDKFRNLADCDIAHYLDKHEFLRQ
ICDHQFPFDNIQAVFHQGACSDTMNHDGKYMMQNNYQYTLDLLDWCQDERIPFLYASSAA
VYGKGEVFREERELEQPLNVYGYSKFLLDQVVRERMKSRLTAQVVGFRYFNVYGMREQHK
GRMASVAFHHFNQYRTQGFVNLFGEYGGYGAGEHSRDFVSVEDVVKVNLYFLDNPEKSGI
FNLGTGRSQPFNDLAAATVNACRAAEGKSPLTLAQMVNEELIRYIPFPDSLKGKYQSFTQ
ADISRLREAGYADEFLTVEQGVERYVAWMLNNLA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatcgtaacaggcgcagcaggcttaatcggcagcaacatcgtcaaaggctta
aacgcgcgcggcatacgcgacatcatcgcggtggacaacctgacgcacggcgacaaattc
cgcaaccttgccgattgcgacatcgcacattatttggacaaacacgaatttttacgccaa
atttgcgaccatcaatttccgtttgacaacattcaggcggtgtttcatcaaggcgcgtgt
tccgacaccatgaatcatgacggtaagtacatgatgcaaaacaattatcaatacactttg
gatttgctggattggtgtcaagatgagcgcattccatttttgtatgcgtccagtgcggcg
gtgtatggcaaaggcgaagtgttccgcgaagaacgtgaattggaacaaccccttaatgtg
tatggctattccaaatttctgcttgaccaagtggtgcgcgagcgcatgaaatcgcgttta
acggcacaggtggtgggtttccgctatttcaacgtttacggtatgcgcgaacagcacaaa
gggcgcatggcttcggtggcatttcatcattttaatcaatatcgtacgcaaggttttgtg
aatttgtttggcgaatatggcggctatggcgcaggcgaacacagccgcgattttgtgagc
gtggaagatgtggtaaaagtgaatttgtattttttggataaccctgaaaaatcaggcatt
ttcaatttgggcacagggcgcagccagccattcaacgatttggcagccgccaccgtcaat
gcctgccgcgctgccgaaggcaaatcgcccctcactttggcgcaaatggtcaatgaggag
ctgattcgctacattcccttccccgacagcttgaaaggcaaataccaaagtttcacgcaa
gccgacatcagccgtttgcgcgaggcaggctatgccgatgaatttttgacggtagaacaa
ggcgttgaacgctatgtggcgtggatgttgaacaatttggcataa
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