Alysiella filiformis: H3L97_07005
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Entry
H3L97_07005 CDS
T06725
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
aff
Alysiella filiformis
Pathway
aff02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aff00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H3L97_07005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
aff02022
]
H3L97_07005
02035 Bacterial motility proteins [BR:
aff02035
]
H3L97_07005
Two-component system [BR:
aff02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
H3L97_07005
Bacterial motility proteins [BR:
aff02035
]
Pilus system
Twitching motility proteins
H3L97_07005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
HTH_50
AAA_16
AAA_19
HTH_30
HTH_SUN2
Motif
Other DBs
NCBI-ProteinID:
QMT30505
LinkDB
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Position
1416995..1418692
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AA seq
565 aa
AA seq
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MTRSSLNRPILVVDDEADIRDLMEITLMKMGLSVDTAEGVNIAKKKLNENKYSLVLTDMR
MPDGSGLEVVEHIMSNNMDTPVAVITALITAFGNADQAVQALKIGAFDYLQKPITLAQLR
TLVKSAVKVQDENQNAPIAPPPVQAAPKSVAAAPVVSKPTDSTWGQNEWADVENTLSEKN
KPTISQVVPQKIVDNITLPNAVAPSMEKRRVASVAAVAPVAETPIVPTAAPKVSGSLKRD
NDVPRILGSSQQIEEVRRLIRKLADSNVPVYISGESGSGKEQAARSIHELSSRADKPFIA
VNCGAIPENLMESEFFGYKKGSFTGADQDRLGFFQHAHGGTLFLDEVADLPLAMQVKLLR
AIQEKAVRRIGDAQEVKVDVRIISATHKNLENLVESGAFRQDLFYRLNVVTLKMPPLREM
HEDLERLIVHLLHKHHGTGIRMTASARDALLHYGYPGNFRELENILERAVALANNNTIDV
EDLQINHQPMSLDAEQFPLTEGLAATGLPNFQMGHTQLQDYLDDVERQILQQALEYTRYN
RTQAAKVLGISFRSMRYRLDRLAIE
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgactagaagcagcctgaatcgccccattttggtggtggacgatgaagccgatattcgc
gatttaatggaaatcaccctaatgaaaatggggctgagcgtggataccgccgaaggcgtg
aatatcgccaaaaaaaaattaaatgaaaacaaatattcactggtgctgaccgatatgcgt
atgcccgatggctcgggtttggaagtggtggaacacatcatgagcaacaatatggatacc
cccgttgccgtgattaccgccttgattaccgcctttggcaatgccgaccaagccgtgcaa
gccttgaaaattggcgcgtttgattatttgcaaaaaccgattacgttggcacagttgcgt
actttggttaaatctgccgtgaaagtgcaagatgaaaaccaaaatgcgcccattgcgcca
ccacccgttcaggcagccccaaaaagcgttgccgccgcacccgttgtgagcaaacccacc
gacagcacatggggacaaaacgaatgggctgatgtggaaaacacattaagcgaaaaaaat
aagcccaccatcagccaagttgtgccgcaaaaaattgtggacaacattaccctgcccaat
gccgttgcgcccagcatggaaaaacggcgcgtggcaagcgtggcggcggttgcccctgtt
gccgaaacccccattgtgccaactgccgcccccaaagtttcaggcagcctgaaacgcgat
aatgacgtaccgcgcattttgggcagttcgcagcaaattgaagaagtgcgccgtttgatt
cgcaaacttgccgacagcaatgtccccgtttacatttcgggcgaaagcggttcgggtaag
gaacaagccgcgcgcagcatacacgaattgtccagccgtgccgacaagccttttattgcc
gtaaactgtggcgcgattcccgaaaatttgatggaaagcgaatttttcggctacaaaaaa
ggcagctttacaggcgcagaccaagaccgtttgggttttttccaacacgcccacggtggc
acattgtttttggacgaagtggcggatttgcccttggcaatgcaagtgaaattgctccgc
gcgattcaagaaaaagccgttcgcagaattggcgatgcccaagaagtgaaagtggacgtg
cgcatcatttccgccacccacaaaaatctggaaaatttggtggaaagcggtgcgttccgc
caagacttgttttaccgcctgaatgtggttacgctgaaaatgccacccttgcgtgaaatg
cacgaagatttggaacgcctgattgtgcatttgctgcacaaacaccacggcacaggcata
cgcatgaccgcctctgcccgagacgcattgttgcactatggctaccctggtaacttccgc
gaattggaaaacattttggaacgcgccgttgcccttgccaacaacaacaccattgatgtg
gaagatttgcaaatcaatcatcagcccatgagcttggacgcggagcaatttccgcttacc
gaagggctcgcggcaacaggtttgcccaatttccaaatgggacacacgcaactgcaagat
tatttggacgatgtggaacgccaaattttgcaacaagcccttgaatacacacgttataat
cgcacccaagccgcgaaagtattggggattagtttccgcagtatgcgttatcgtttggac
cgtttggcgattgagtaa
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