Alysiella filiformis: H3L97_08315
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Entry
H3L97_08315 CDS
T06725
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
aff
Alysiella filiformis
Pathway
aff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H3L97_08315 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aff03400
]
H3L97_08315 (recB)
Enzymes [BR:
aff01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H3L97_08315 (recB)
DNA repair and recombination proteins [BR:
aff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H3L97_08315 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
RXT2_N
Motif
Other DBs
NCBI-ProteinID:
QMT30741
LinkDB
All DBs
Position
complement(1677985..1681593)
Genome browser
AA seq
1202 aa
AA seq
DB search
MAQTLNPLTLPLAHTNLIEASAGTGKTWNIAALFLRLVLLPLPQHSQPLSVDKILVVTFT
KAATAELKTRLRARLDEALSALHRTENAFRQPENLREHCGDDFLFQLLQQALAAESDPNT
AQARVMLRLKAAIGDFDNAAVYTIHSFCQRVLQDFAFLCGVPFDIELDEQSGKDELLIAA
QDFWRTQIAQDIDFAELLYHRTSPKKQVDALHNFVARPYLTLRESDVGKDLSAAKRDFQA
AWQRVSTQIAQIGETFWQIHPNLNGVSFNEKTFRKKFDFLNEVAGSRVTAQTLWENLQNS
KGESPFSADFIASKIKKGKEIATDKIHEIAQLDDLANACIRLIEKEESTLVWLNHQLLQH
LRQHQQRHKQRSPIRHFDDLLLDVYHALHHNPQHAAALSENMAHNWQVALIDEFQDTDPL
QYAIFRSAFAHNRIPLFLVGDPKQAIYSFRGADIFAYLQAAEDASANNIYTLSTNRRSHA
KLINSISALFSRENPFVLPEIAYQTVDASREHSHLLPQGNALTVRWLNRQQNQDDDKDNA
AKLEKRAASYCASEIAQMLNQSAAGSLKLKGEPLRADQIAVLVRARKDGVLVQRELKKRH
IQSVLLSRDSIFAEPEAEALAALLDFFIQPQRTAMLRFLLAGCLFEYTAEEILQLNQHET
ELLKWIDSAQSCLNVWLEHGIYAAIQQFVSRHGVETRLLTQGNERTLTNLHQLMELLAQE
DEQSHSPTSLRQWLGQHIAATRDKESAGEHILRLESDENLVKIVTMHASKGLQYPIVFCP
FAWKASGSRNVPEWQIVHHAHQAALIHKNQLNQDDKEMGERERLSEDLRLMYVACTRAEE
QLHLYMASYDSSDRSAFAYLLGAQDVAKQPENYWAAWQQFVQEKQSSQTDMLLIDHNQNR
VEHHFEPPPHRSDFQAAVFQPRRYQFVRHTSFTGLSKQNQRLAEQAEAARAELLPTLDNV
EQIAHQPSEQGNSIHHFPQGTSTGLCWHSILEQGDFSQPASQQIALIDEKLAHYGFDPET
WRESVAQMFDRVRQMPLFAQHNLAQSLPENHIMEWGFLLHTDDFKVQAVRDWFSQPHLGL
SPEIAQAAQGLNFYDVQGFINGFVDLFYHSNEMTAVVDYKSHYLGDTAQAYHKHALNHAI
AEHHYYLQALIYAIAAARYLQSRHALPETIAVRFVFLRGLDGTSMHSVWQWDIATQDLAQ
WL
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaacgcttaatcccctaactttgcctttggcgcacaccaatttgattgaggca
tcggctggcacgggcaaaacttggaacattgccgcgctgtttttgcgactggtgctgttg
cccctgccccaacacagccagcctttgagcgtggacaaaattttggtggttacgtttacc
aaagccgccaccgccgagctgaaaacgcgacttcgcgcccgtttggacgaagccttgtct
gcattgcaccgcaccgaaaatgcgttcaggcagcctgaaaatttgcgcgaacattgtggc
gatgattttctgtttcagcttttgcaacaggcacttgctgccgaatccgaccccaacacc
gcccaagcgcgggtcatgttgcgcctgaaagcggcgattggcgattttgacaatgcggcg
gtttacaccatacacagcttttgccagcgcgtgttgcaagatttcgcctttttgtgtggc
gtgccgtttgacattgaattggacgagcaatcgggcaaagacgaattgctcattgccgca
caagatttttggcgcacgcaaattgcccaagatattgattttgctgaattgctttatcat
cgcacttcgcccaaaaagcaagttgatgccttgcacaattttgtggcgcgaccctatttg
actttgcgcgaaagcgatgtgggcaaggatttgtctgccgccaaacgcgattttcaggca
gcgtggcaacgtgtcagcacacaaattgcccaaattggcgaaacattttggcaaatccac
cccaatttaaatggggtcagtttcaatgaaaaaacctttcgcaaaaaatttgattttttg
aatgaagtggcaggcagccgcgttaccgcacaaactttgtgggaaaatttgcaaaacagc
aaaggcgaaagccccttttctgccgattttattgccagcaaaatcaaaaaaggcaaagaa
atcgccaccgataaaattcacgaaatcgcacaattagacgatttggcaaatgcctgtatc
cgattgattgaaaaagaagaaagtacactggtgtggctcaatcatcaattactgcaacat
ttgcgccaacaccagcaacgccacaaacaacgcagccccattcgccattttgatgatttg
ttgcttgatgtgtaccacgctttgcaccacaatccgcaacacgctgccgcgctgtctgaa
aacatggcgcacaactggcaggtggcgttgattgacgaatttcaagacaccgaccctttg
caatatgcgatttttcgcagcgcgtttgcccacaatcgcattccgctttttttggtgggc
gaccccaaacaggcaatttacagctttcgcggtgccgatattttcgcctatttgcaggca
gccgaagacgcatcggcaaacaacatctacacattaagcaccaatcgccgcagccacgcc
aaattgattaacagcatcagtgccttgttttcgcgtgaaaatccatttgtgctgcctgaa
attgcctatcaaactgtggacgcatcacgcgaacacagccatttgttgccacagggcaat
gcgctgacggtacgttggctcaatcgccagcaaaatcaagatgatgataaagacaatgcc
gccaaattggaaaaacgcgccgcctcttattgcgccagcgaaatcgcgcaaatgctcaac
caaagcgcggcaggcagcctgaaactgaaaggcgaaccgctccgagccgaccaaattgcg
gtgttggttcgggcgcgtaaagatggcgtgttggtgcagcgcgaattgaaaaaacgccac
attcaaagcgtgttgttgagccgcgacagcatttttgccgaacccgaggcggaggctttg
gcggctttgttggattttttcattcaaccgcagcgcacggcaatgttgcgatttttgctt
gcaggctgcctgtttgaatacaccgccgaagaaatcttacaattaaatcaacacgaaacc
gaattgctcaaatggatagacagcgcacaaagctgcctgaatgtgtggctggaacacggc
atttacgcggcaattcaacaatttgtgtcgcggcatggcgtggaaacgcgcttgctcaca
cagggcaatgagcgcacgctcaccaatttgcatcagcttatggaattgttggcgcaagaa
gatgaacaaagccattcgcccacatcgttgcgacaatggttggggcaacacatcgccgcc
acgcgcgacaaagaaagcgcaggcgaacacattttgcgtttggaaagcgatgagaatttg
gtcaaaatcgttaccatgcacgcgtccaaaggtttgcaatatccgattgtgttttgccct
tttgcgtggaaggcgagcggcagccgcaatgtccccgaatggcagattgtccaccatgcc
catcaagcggcgttaatccacaaaaatcaactcaatcaagatgataaagaaatgggcgaa
cgcgaacgcttgtcggaagacttgcgtttgatgtatgtggcttgcacccgtgccgaagag
caacttcatctttacatggcaagctacgacagcagcgaccgcagcgcatttgcctatttg
ctgggcgcgcaagatgtggcaaagcagcctgaaaactattgggcagcgtggcagcaattt
gtgcaagaaaaacaatcgtctcaaaccgatatgctgttgattgaccacaaccaaaatcgc
gtggaacaccattttgagccaccgccacatcgcagcgattttcaggcagccgtgtttcaa
ccgcgccgctatcaatttgttcgccacaccagttttacgggtttgagcaagcaaaatcaa
cgccttgccgaacaagccgaagccgcccgtgccgaacttttgcccacgctggacaatgta
gaacaaatcgcccatcagcccagcgaacagggcaacagtattcatcattttccgcaaggc
acaagcacaggtttgtgttggcacagcattttggaacagggcgatttcagccagccagcc
agccagcaaatcgccttgattgatgaaaaattggcgcattatggttttgaccccgaaaca
tggcgcgagtcggtggcgcagatgtttgaccgcgttcgccaaatgccgcttttcgcgcaa
cacaatttggcgcaaagcctgcctgaaaatcacattatggaatggggatttttgttgcac
accgatgattttaaagtgcaagccgtgcgcgattggttcagccagccgcatttgggttta
tcgcccgaaatcgcgcaggcggcgcagggtttgaatttttatgatgtacagggtttcatc
aatggttttgtggatttgttttaccacagcaatgagatgacggcggtggtggactacaaa
tcgcattatttgggcgacacggcacaagcctatcacaaacacgctttgaatcacgccatt
gccgaacaccattattacttgcaagccctgatttatgcgattgcggcggcgcgttatttg
caatcgcgccacgcgctgcctgaaaccatagcggtgcgatttgtgtttttgcgcggtttg
gacggcacatcaatgcacagcgtgtggcaatgggacattgccacgcaagatttggcgcaa
tggttgtga
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