Alysiella filiformis: H3L97_09310
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Entry
H3L97_09310 CDS
T06725
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
aff
Alysiella filiformis
Brite
KEGG Orthology (KO) [BR:
aff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aff03021
]
H3L97_09310 (rpoH)
Transcription machinery [BR:
aff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H3L97_09310 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
HTH_3
IF2_N
HTH_PafC
UCR_14kD
HTH_AsnC-type
SLC12
Ham1p_like
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QMT30919
LinkDB
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Position
complement(1878983..1879852)
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AA seq
289 aa
AA seq
DB search
MNAIALPVLSGHGSLEQYIHTVNNIPMLSLEEESSLAERQIKGDLEAAKKLILSHLRVVV
SIARGYDGYGLNQADLIQEGNIGLMKAVKRFEPNHGARLFSFAVHWIKAEIHEFILRNWR
LVRIATTKPQRKLFFNLRSMRSSLNALSPKEAQVIADDLGVKLSEVMEMEQRMTGHDIAL
LAENNDDDDNQFAPIDWLSDTHHEPSQQLMQKAHHALQTEGLQNALAQLDERSRRIVETR
WLQDDGGMTLHELAAEYGVSAERIRQIEAKAMQKLRGFLANQADDLVVE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgattgcattacccgttttaagtggacacggcagtttggaacaatacattcac
accgtaaacaacatacccatgctgtctttggaagaagaaagcagcttggcagaacgccaa
atcaaaggcgatttggaagccgccaaaaagctgattttgtcgcatttgcgcgtggtggtt
tccattgcgcgtggctacgatggttatggtttgaaccaagccgacttgattcaagaaggc
aacattggcttgatgaaagccgtgaaacgctttgaacccaaccacggtgcgcgtttgttt
tcctttgccgtgcattggattaaagccgaaattcacgaatttattttgcgaaactggcgt
ttggtgcgcattgccaccaccaaaccgcagcgcaaactgtttttcaatttacgcagtatg
cgcagcagcctgaacgcactttctcccaaagaagcgcaagtgattgccgatgatttgggc
gtgaaattgtcggaagtcatggaaatggaacagcgcatgactgggcatgacattgcattg
ctggctgaaaacaacgatgacgatgacaaccaatttgcccccattgattggttgagcgac
acccaccacgaacccagccaacaactcatgcaaaaagcccaccacgcattgcaaaccgaa
ggtttacaaaacgctttggcgcaacttgatgagcgcagtcgccgcattgtggaaacgcgc
tggttgcaagacgatggcggcatgaccttgcacgaattggcggcagaatatggcgtatca
gccgaacgcattcgccaaattgaagcgaaagccatgcaaaaattgcgcggatttttggca
aatcaagccgatgatttggttgtggaataa
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