Alysiella filiformis: H3L97_09320
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Entry
H3L97_09320 CDS
T06725
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aff
Alysiella filiformis
Pathway
aff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H3L97_09320 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aff03400
]
H3L97_09320 (recD)
Enzymes [BR:
aff01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H3L97_09320 (recD)
DNA repair and recombination proteins [BR:
aff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H3L97_09320 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
Helicase_RecD
AAA_11
UvrD-helicase
AAA_22
SH3_13
nSTAND3
AAA_16
SLFN-g3_helicase
DEAD
T2SSE
SRP54
PhoH
AAA
AAA_28
AAA_5
Herpes_Helicase
Mg_chelatase
Flavi_DEAD
AAA_24
NTPase_1
ATPase
Motif
Other DBs
NCBI-ProteinID:
QMT30921
LinkDB
All DBs
Position
1882047..1883744
Genome browser
AA seq
565 aa
AA seq
DB search
MSDTAHIADNVLSLLHHVHAPAADCVAPFLPRLFAALADGHTFIYLNKEETAQLARAQPI
VGADAQSPLVLYRNRLFLAKFWQLEQHLAREIHRLSHYRRLPERWDFIQQQLQAWFADSG
SQDQQAAAALTLLHNFMLISGGPGTGKTTTVAKLLALLCHDTLPRIALAAPTGKAAARMS
EALKNAVTRIDGLPESTAAHLRQLNGQTVHRLLALTPPQMLPEYDADNRLPLDILIVDEA
SMLDLYLLHQLLQALPNSCRVILLGDENQLPSVSAGAVLSALMQSSAALPEPMVRELQQL
LPSIQLRHLRQGTAKLTISHRFGAESGIGCLARAVVSGEAEQAWQQFTQFPQTLSHHQHD
IAHIAQQLYRAHQAYWQAIDDNHLDRAFAHQADVLVLSAQRADAHALNQAYLQQLHQHRR
AHPDQPWFKGQMLIITRNDPSTQLYNGDVGIVLPHEYGLAAWFPDTAYRFRPIALSRLPE
HENAFTLTVHKSQGSEYREIWFLPPTQRQDDDFSRALLYTAITRAKEKFVYCGNKSSFQK
ACNTPDKRRSALNEWLTQIQGDLFV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaccgcccacattgccgataatgttttatctttactgcaccatgtgcacgcg
ccagccgccgattgtgttgcgccatttttgccgcgcttgtttgcggctttggctgatgga
cacacctttatctatttaaataaagaagaaaccgcccagttggcacgcgctcaaccgatt
gtgggggcagacgcgcaatcgcctttggttttgtatcgcaatcgtttgtttttagccaaa
ttttggcaattagaacaacatttggcgcgtgaaattcatcgcctgtcgcattaccgcagg
ctgcctgaacgctgggattttatccaacaacaattacaggcgtggtttgccgattcaggc
agccaagaccaacaagccgccgccgctttaactttattgcacaatttcatgctcatcagt
ggggggccgggaacaggcaaaaccaccaccgttgccaaattgctggctttgctctgccac
gacaccttgccgcgcattgctttggcagccccaacaggcaaagcggctgcgcgtatgtcg
gaagccttaaaaaatgcggttacacgcattgatgggctgcctgaatccaccgccgcacat
ttgcgccaattaaatgggcaaacggtacaccgtctgctggcactcacgccaccccaaatg
ctgcccgaatacgatgccgacaaccgcctgcctttggacattctgattgtggacgaagcc
agtatgttggatttgtatttgctgcaccaattattgcaagccctgcccaactcctgtcgc
gtgattttgttgggcgatgaaaaccaactgccttcggtcagcgcaggggcggtgttgtcg
gctttaatgcaaagcagtgccgcgctgcctgaaccgatggtgcgcgaattacagcaatta
ttgccatcaattcagttgcgccatttgcgtcaaggcaccgccaaattgaccatcagccac
cgttttggcgcagaaagtggcataggttgcttggcacgcgcggtggtttcaggcgaggcg
gaacaggcttggcagcaatttacccaatttccacaaaccctgtcgcaccatcagcacgac
atcgcccacatcgcccaacagctttatcgcgcccaccaagcctattggcaagcaatagac
gacaaccaccttgaccgcgcctttgcccatcaagccgatgtgttggtgttgagcgcacaa
cgcgccgatgcccacgcactcaatcaagcctatttgcaacaactgcatcaacaccgccgt
gcccaccccgaccagccgtggttcaaaggacaaatgctcatcatcacgcgcaacgacccc
agcacccaactttacaatggcgatgtgggcatcgtgttgccacacgaatacggtttggca
gcgtggtttcccgacaccgcataccgttttcgccccatcgcattgagcaggctgcctgaa
cacgaaaacgcctttaccctaaccgtacacaaaagccaaggttcagaataccgcgaaatt
tggtttctgccccccactcaacgccaagacgatgatttcagccgcgccctgctctacacc
gccatcacacgcgccaaagaaaaatttgtttattgtggcaacaaaagcagctttcaaaaa
gcctgcaacacccccgacaaacgccgcagcgcattaaacgaatggctcacacaaattcag
ggagatttgtttgtgtaa
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