Archaeoglobus fulgidus DSM 8774: AFULGI_00025480
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Entry
AFULGI_00025480 CDS
T03231
Name
(GenBank) Superfamily II DNA and RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
afg
Archaeoglobus fulgidus DSM 8774
Pathway
afg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFULGI_00025480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afg03019
]
AFULGI_00025480
03009 Ribosome biogenesis [BR:
afg03009
]
AFULGI_00025480
Enzymes [BR:
afg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AFULGI_00025480
Messenger RNA biogenesis [BR:
afg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AFULGI_00025480
Ribosome biogenesis [BR:
afg03009
]
Prokaryotic type
rRNA helicases
AFULGI_00025480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
P-loop_SecA
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIG99261
UniProt:
A0A075WGX2
LinkDB
All DBs
Position
2191752..2192840
Genome browser
AA seq
362 aa
AA seq
DB search
MEFEDLGISENGLNAVRRKGFEKPTEIQREIIPRFFEGEKDMVGQAQTGSGKTAAFALPI
LDLVDERSKDVQAIVITPTRELALQVKDEIESLRGGKKVHVLAVYGGQPIFPQIERLRKG
VQIVVGTPGRVIDHLERRTLSLEKVRFFVLDEADRMLDMGFIDDIERILRHAGAERRVLM
FSATMPPEVLRLARRYMRDYEVVRVHSKITPENVEHRCLKVNPEKRFEHLCRILDENNFY
GIVFCQTKKETRELGRRLRARGYKADALNGDIPQHKRESILRNFRKGYTRVLVATDVAAR
GIDVKDLTHVVNYSIPQDPEAYIHRTGRTGREGKRGKAITFVAPWESRKLKIIERTAKVR
FR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
gtggaatttgaagatttgggaatctcagaaaacggtttgaatgcagttagaagaaagggt
tttgagaagcctacggaaattcagagggaaatcataccgaggtttttcgaaggtgaaaag
gatatggtcggccaggcacagacgggctcggggaaaacagctgcctttgccctgccaatt
ctcgaccttgtggatgaaagaagcaaggatgtgcaggccatagtaataacgcccacaagg
gagctggctttgcaggtaaaggacgagattgagtcgctcagagggggcaaaaaggttcac
gtcctcgctgtttacggcgggcagcccatattccctcaaattgagaggctgaggaagggc
gtgcagatagtcgtgggcacaccgggaagagttatcgaccaccttgagaggagaacgctt
tcgctcgaaaaagttcggttcttcgtgcttgacgaggcggacaggatgctcgacatgggc
ttcattgacgacattgagaggatcctcagacacgcaggcgcggaaaggcgtgttctgatg
ttctccgcaaccatgccccctgaagttttgaggctggcgaggcgttacatgagagattac
gaggttgtgagagttcacagcaaaatcactcccgaaaacgtcgagcacagatgtctgaag
gttaacccggaaaagaggttcgagcatctctgcagaattctcgacgagaacaacttttac
ggcatcgttttctgccagacgaaaaaagagacaagagaacttggaagaaggcttagagcg
aggggatataaggcagatgcgctgaacggagacattccacagcataaaagagagagcatc
cttagaaatttcagaaaaggatacaccagagttcttgtcgcaacagatgttgccgcaagg
ggaattgacgtgaaagacctcacccacgtcgtcaactactctatcccgcaggatccagaa
gcatatatccacagaaccggaagaaccggcagagagggaaagaggggtaaggccataacc
ttcgttgctccctgggagtcgaggaagctgaaaataatagagaggactgcgaaggtccgg
tttaggtaa
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