Acidithiobacillus ferrianus: GL267_000500
Help
Entry
GL267_000500 CDS
T10957
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
afh Acidithiobacillus ferrianus
Pathway
afh03030
DNA replication
afh03410
Base excision repair
afh03420
Nucleotide excision repair
afh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GL267_000500 (polA)
03410 Base excision repair
GL267_000500 (polA)
03420 Nucleotide excision repair
GL267_000500 (polA)
03440 Homologous recombination
GL267_000500 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afh03032
]
GL267_000500 (polA)
03400 DNA repair and recombination proteins [BR:
afh03400
]
GL267_000500 (polA)
Enzymes [BR:
afh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GL267_000500 (polA)
DNA replication proteins [BR:
afh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GL267_000500 (polA)
DNA repair and recombination proteins [BR:
afh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GL267_000500 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GL267_000500 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
XRI69206
LinkDB
All DBs
Position
103058..105757
Genome browser
AA seq
899 aa
AA seq
DB search
MSQDPRILVDASSFLYRAFHALPDLRAPDNLPTGAIYGVANMLRRLQKEHPSDEIIVVFD
APGGTFRDQIYAEYKAQRPPMPEELRVQVPLLHAWITAMGLPLIIAPGVEADDVIGTLAR
QAPADQSVLIITGDKDMTQLVNARVLLIDTMKGVSTDMSEVEARFGVAPERIADFLALTG
DKADNIPGVPGVGAKTAAKWLAQYGDLTGILAHADEIGGKVGEALRAAMDFLPRSRALAT
IRCDVMLPDADYRRRPADATTLRRLAQRLGFHAWLKDLPAVDTDTAPPPAGGAIDRGGYR
AITTVPALEALLADLKRATLVALDTETTDLDPLRAELVGISCAWQAEGNHQAIYIPLGHR
DDSPQLDRDIVLAVLRPWLEDPRAAKIAQNAKFDWRVFWAQGIQPMGLLRDTLLESYVLD
SSRNGHDLDSLAERYLQHQNIRYEEVAGKGKSARSFADVPVAEALPYAAEDADVCLRLDA
HLWPRCAAEAGLRRVLTEIEMPLVLVLARMETAGVKVDRGQLETLSAELATEMANAEQKA
FNAAGQTFNLNSPKQIQEILFDKMRLPVLKTTPGGQPSTSEGVLAQLAVHAPLPRWILDY
RSMAKLKNTYADALPQMIHPGTGRVHTHFQQAVAATGRLASSDPNLQNIPVRSEQGRRIR
QAFVAEPGYWLVSADYSQIELRIMAHLSRDARLLQAFAEGQDIHAATAAEVFNLAPEAVD
GAARRAAKAINFGLIYGQTPYGLSQQLGIDQAAARRYMDRYFERYPGVLAYMERTRALAK
TQGYVETLFGRRLYVPEIRSSNPARRNYAERAAINAPMQGTAADLIKRAMIAVDAWLQEA
PERGRMILQVHDELILEVPEAGLEAAQSALREHMEGVAELAVPLLVGLGVGKNWDEAHG
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagacccccgtattcttgtcgatgcttccagttttctctaccgcgcctttcat
gcattgcccgacctgcgcgcgcccgacaacttgcctacgggagctatttatggtgttgcc
aacatgcttcgccgtctgcagaaggagcatcccagtgacgaaatcatcgtggtcttcgat
gctcccggtggcactttccgcgatcagatctatgcggaatacaaggcgcaacggccaccc
atgccggaggagttgcgggtgcaggttcccctgctccacgcatggatcacggcgatgggg
ttaccgctgatcattgcgccgggggtggaggcggacgacgtcatcggtaccctcgcacga
caggcgccagccgatcagtcggtactcatcatcaccggtgacaaggacatgacgcaactg
gtgaacgcgcgggtgctgctgatcgacaccatgaagggggtttcaacggacatgagcgag
gtcgaggcccgtttcggtgtcgccccggagcgcatcgcggactttctcgccctcactgga
gataaggcggacaatatccccggcgtgcctggggtcggggcgaaaacagccgccaagtgg
ctagcgcaatatggcgatctgacgggcattctggcgcatgccgacgagattggcggcaag
gttggcgaggcgttgcgcgcggcgatggattttttgccgcggagccgcgcgctggcgacc
atccgttgcgatgtcatgttgcccgatgccgactatcggcggcgcccggccgatgcgaca
acattgcgtcgactggcgcagcggctgggtttccatgcctggctcaaggatctgcctgcc
gtcgatacggataccgcgccgccgcctgcgggtggcgcgatagaccgcggcggttaccgc
gctattaccacggtgccggcgctggaagccctgttggcggatttgaaacgggcgacgctg
gtcgccttggatacggaaaccaccgatctcgacccgctgcgcgccgaactggtgggcata
tcctgcgcctggcaggcggaaggaaatcatcaggcgatatacattcccctggggcatcgc
gacgacagtccgcaactggatcgagacatcgtgctcgctgttttgcgcccttggctggaa
gacccgcgggccgcgaagatcgctcaaaatgccaaattcgactggcgggtgttctgggcg
cagggcattcagcccatgggtctgctgcgcgataccctgttggaaagctatgtgctggat
agcagccgcaacggccacgatctcgacagcctcgccgagcgttatctgcagcatcagaat
atccgctatgaagaggtcgccggcaagggcaagtcggcccgcagctttgccgatgtgccg
gtggcggaggcgttgccctacgcggcggaagatgccgatgtctgcttgcggctggatgcg
cacttgtggccgcgatgcgctgctgaagctggtttgcgacgggtgctgacggagatcgag
atgccgctggtgctggtgctggcacggatggagacggctggcgtcaaggtcgatcgcggt
cagcttgaaaccctcagcgcggaactggcgacggagatggcaaacgctgaacagaaggcc
ttcaacgcggctggacagaccttcaacttgaactcacccaagcagattcaggagattctt
ttcgacaagatgcgtttgccggtgctgaagacgacacccggcggtcagccttcgaccagc
gagggggttctcgcccagttggctgtgcatgcccctctgccgcgctggattctcgattat
cggagcatggccaagctcaaaaacacttatgccgatgccttgccgcagatgatccatccc
ggcaccggccgggtccatacgcatttccagcaggcggtggcggcgaccggacggctggcg
tccagcgacccgaatctgcagaacatcccggtgcgcagcgagcaggggcggcgtattcgt
caggcctttgtcgccgagccgggatactggttggtcagtgccgactattcgcagattgaa
ctccgcatcatggcccatctttcgagggatgcgcgtttgttgcaggcctttgccgagggg
caggacatccacgcggcgaccgccgccgaagtgttcaacctggcgccggaagcggtggac
ggtgccgctcgccgcgcggccaaggccatcaatttcggcttgatttatgggcagaccccc
tacggactatcccagcaactgggcatcgatcaggccgccgcgcggcgatatatggaccgc
tattttgagcgctaccccggcgttctcgcttacatggagcggacccgcgccctggccaaa
acacaagggtatgtggaaaccctttttggtcgccgtctctatgtgccggaaattcgttcc
agtaacccggcgcgtcgtaattatgccgagcgcgccgccatcaacgcgcccatgcagggc
acggcggcggatttgatcaagagggcgatgatcgccgtcgatgcgtggttgcaggaggcc
ccggaacggggccggatgattctgcaggtccacgacgaattgattctggaagtgccggaa
gcggggttggaagccgcccaatcggcgttacgggaacacatggagggagtggcggaactg
gctgtgcccttgctggtgggcttgggtgtcggcaaaaactgggatgaggcccacggttga
DBGET
integrated database retrieval system
