Acidithiobacillus ferrianus: GL267_001095
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Entry
GL267_001095 CDS
T10957
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
afh Acidithiobacillus ferrianus
Pathway
afh03440
Homologous recombination
Brite
Enzymes [BR:
afh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GL267_001095 (recB)
DNA repair and recombination proteins [BR:
afh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GL267_001095 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XRI69313
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Position
complement(215062..218673)
Genome browser
AA seq
1203 aa
AA seq
DB search
MADAPMITILDPLHLPLHGSRLIEASAGTGKTWTIAALYLRLILGHGAKDERFARALLPE
DILVMTFTRAATQELKERIRDRLQTAAQYFRHTGDPMAPDALLEALLVDYADPGVRAQAA
HQLALAADAMDDSAIFTIDAWCQRTLREHAFATGSDFRETLLPDETDLRDDAVRDFWRQE
IYPLGESALSEVLQLFSCPDKVRQETEALCKLDPPLPTPESTLADWLPDALAAPRRRLAA
LKAQWAAEQDAFAVWLSGLVNGPKANNPLNGNRLSAAIVTRILAALRDWADHPDMLIPDE
PDTCQRLSASKLPGYCKNKPPLVVHPAAEVLDTLFSALETITQQFARLHGEIRTHAAAWI
NARLSQIKAQRGQVSFTDHQRRLAGVLHDSTRGPAFAARLRQRYPVALIDEFQDTSALQY
QIFDDIYHAADNDPDTLLLLIGDPKQSIYAFRGADIDSYLQARRLTEGRHYALGTNYRSS
HALVSTLNTLYSAVEQNSPQGAFAYAAPGTSNPLPYQPVQAHGHKKCWQTGGIPAPTLTF
WVSAEPLSKGDYLERCAEQTAERIATLLTDPTAVFVEAGREPRPIQPRDIAILVRDRFEA
ASIRQALERRQLHSVFLSERDSVYTSEEARDLLLWLEAVAEPEDTRRLRVALALPLLGQP
LSALDAFNQDEAVWEAQLEQFQDLSRQWRRQGVLAMLHHSIHQFGIAARLLTRVEGERRL
TNLLHLGELLQQASATLDGPEALIHHLREAIAAGSNQSDAHILRLESDAELLRVVTIHAA
KGLQYPLVFLPFIATRKPAKASPFTITRHAEGQPAIHWESGDTAAAERARLQEDLRLLYV
ALTRAEHALWLGLATPKTAGTPIFTGSAIAHLLGSQCPPVRDLATLLDDCARRSPEIAVE
TLPGHLPTTRVARHPDGTRNPPAEYTARFEKHWGVASFSHLVRDLPADPAAATPRRARTG
APWHRYPQGMNAGTFLHAQLQRLALSDFDQADQDHFAEPLHKACTQAGLSDWTEETAEWL
HAIIHSPLAPLAATLCDLRDPRSEMAFWFPSDALRSEELDRLCQQHIFPGIGRPRLPQRI
IHGMMRGSMDLVFEQDRRYYILDYKSNTLGSDDADYHAEALRNATLGHRYELQSSLYQLA
LHRLLRQRMGSGYRPGTHLGGTLFCFLRGLRGPERGMLHLPADLALLDALDRLFGLPQRA
TQP
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacgcacccatgatcacgatcctcgatcccttgcatctgcccctgcatggcagc
cgcctcatcgaggccagcgccggtaccggcaagacctggaccatcgccgccctctatctg
cgcctgatcctcgggcacggcgcgaaggacgagcgcttcgcccgcgcccttctgcccgaa
gacattctggtgatgaccttcacccgcgccgccacccaggaactcaaggagcgcattcgc
gaccgtctacaaaccgccgcccaatatttccggcacaccggcgatcccatggcgccggat
gcccttctcgaggcactgctggtcgattacgccgatcccggggtccgcgcccaggccgct
caccagctcgccctcgccgccgacgccatggacgacagcgccattttcaccatcgacgcc
tggtgccagcgcaccctgcgcgagcatgccttcgccacgggcagcgacttccgtgaaacc
ctgctcccggatgagaccgatctgcgcgacgacgccgtgcgcgacttctggcggcaggaa
atctacccgctgggcgaatccgccctcagtgaggtcctccagctcttttcctgccccgat
aaagtccggcaggagacagaagccctgtgcaaactcgacccgcccctgcccaccccagaa
tccacgctggcggactggctgcccgatgccctcgccgcaccccgacggcgactcgccgcc
ctcaaggcgcaatgggcggcggagcaggatgcgttcgcggtgtggttgtcagggctcgta
aacggtcccaaagcgaacaatccattgaatggtaaccgcctaagcgcagccattgtcacc
cgaatcctcgccgcattgcgtgattgggccgaccatcccgacatgctgatccccgacgaa
ccggatacatgtcagcgcctttctgccagcaagctgcccggctattgcaagaacaagccg
cctctcgtcgttcaccccgccgccgaggtactggataccctgttcagcgcgctagagacc
atcactcagcaattcgcccgactgcacggcgaaattcgcacccacgccgccgcctggatc
aacgcccggctgagccagatcaaggcccagagggggcaggtgagctttaccgaccaccag
cggcgtctcgccggggtcctgcacgacagcacccggggaccggcgttcgccgctcgcctg
cggcagagatatcccgtcgctctcatcgacgagtttcaggatacctccgccctgcaatat
cagatcttcgacgatatctatcatgccgccgacaacgaccccgacaccctgcttctgctc
atcggtgaccccaagcagtccatctacgcttttcggggcgcggacatcgacagttatctg
caggcgcgtcgcctgaccgagggtcgccattatgcgctcggcaccaactatcgctccagc
cacgcactggtcagcaccctcaacaccctctacagcgctgtcgaacaaaatagcccccaa
ggcgcttttgcctatgccgcgcccggcaccagcaacccgctcccctatcagcccgtgcag
gcccatggccataaaaaatgctggcagaccggtgggatacccgccccgaccctcaccttc
tgggtcagcgccgagccgctcagcaaaggagactacctggagcgctgcgccgagcagacg
gcagaacgcatcgccaccctgctgaccgatcccaccgccgttttcgtcgaagcgggtcgg
gaaccccggcccattcaacccagagacatcgccattctcgttcgtgaccgctttgaggcc
gccagcatccgccaggcgctcgaacgccgccaactgcacagcgtcttcctttcggagcgg
gactccgtctacaccagtgaggaggcccgcgacctgctcctctggctggaagccgtcgcc
gaacctgaagatacccgccgcttgcgcgtcgccctcgccctgccgctgctggggcagccc
ctcagcgccctggatgccttcaatcaggacgaggcggtctgggaagcgcaactggagcaa
ttccaggatctgtcccggcaatggcggcggcagggcgtgctggctatgcttcaccacagc
atccaccagttcggcatcgccgcccggctgctgacccgggtcgagggcgaacgccgcctc
accaacctgctccacctcggcgaactcctgcaacaggcgagcgccaccctcgacggcccc
gaagccctcatccaccacctgcgcgaggccatcgccgccgggagtaatcagagtgacgcc
cacatcctgcggctggagagcgatgccgaactgctgcgcgtagttaccatccacgccgcc
aaaggcctgcaatacccgctggtgttcctacccttcatcgccacccgcaagccggccaag
gccagcccgttcaccatcacgcggcatgcggagggacagcccgccatccactgggaaagc
ggcgacacggcggccgcagaaagggcgcgattgcaggaagacctccgcctcctctacgtc
gccctcacccgtgccgagcacgccctctggctgggtctcgccacaccaaagacggcggga
acaccgatctttaccggcagcgccatcgcccacctgctgggcagccaatgcccccccgtc
cgtgatctcgccaccctgctcgacgactgcgcccgacgctccccggagattgccgtcgag
acgctaccgggtcacctccccacgacgcgggtcgcgcgtcaccccgatggcacccgcaac
ccgcccgcggaatataccgcgcgcttcgagaagcactggggcgtcgccagcttctcccac
ctggtgcgcgatcttcccgccgatccggcggcggcgacgccccggcgcgcccggaccggc
gcgccctggcatcgctatccgcagggcatgaatgccggcacctttctccacgcgcaactg
caacggcttgccctgagcgattttgatcaagcggatcaggaccactttgccgaaccactg
cacaaggcctgtacccaggccggcctgagcgattggaccgaagaaaccgccgaatggctg
cacgccatcatccatagccccctcgcccccctcgcagcgacgctctgcgatctccgcgac
ccccggagcgaaatggccttctggtttcccagcgatgccctgcgcagcgaggagttggac
cggctctgtcaacagcatattttccccggtatcgggcgccccaggctccctcagcggatc
atccacggcatgatgcgcggctccatggacctggtcttcgagcaggacaggcgttattac
atccttgactacaaatccaacaccctcggtagcgacgacgccgattaccatgccgaagcc
ctgcgcaacgccaccctcggccatcgttatgaactgcagtccagcctctatcaactggcc
ctgcaccgcctgctgcgccagcgcatgggcagcggctaccggcccggaacccatctcggt
ggcaccctcttctgcttcctgcgcggactgcgaggaccggaacggggtatgctccatctt
cccgccgacctcgccctgctcgacgccctcgaccgcctcttcggcctgccgcagcgtgca
acccaaccatga
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