Acidithiobacillus ferrianus: GL267_001100
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Entry
GL267_001100 CDS
T10957
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
afh Acidithiobacillus ferrianus
Pathway
afh03440
Homologous recombination
Brite
Enzymes [BR:
afh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GL267_001100 (recC)
DNA repair and recombination proteins [BR:
afh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GL267_001100 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XRI69314
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Position
complement(218655..222080)
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AA seq
1141 aa
AA seq
DB search
MSRQDIEPGFIVLHGDRLEWLSDAVLEWLHEHPLQALEEEIFLVQSNGIAEWLQWTLAAH
EGICAAVRVTLPGRFLWDSYGRVLGQDILPARAPLDKAPLTWRLMRLLPELLPQTDFAPL
RHFLDRVAQPDGASERLWQMAAQIADLFDQYQVYRGDWLTDWAAGQSLLRRGDGERMALP
AGQSWQPRLWQALRRDLQQNGPDRALGRAQVHDRFLAALNAGQPPAAPLPRRVTLFGAAT
LPEQSLTALAALGRRMQVILAVPNPCRYHWADIVSGRELLRRERRRQPLRHGRDLSNTAP
EDLHQFGNPLLAAWGRQGRDFLNLLDQCDETMTLRQQSSLPRIDLFSEDRGDTLLRQLQV
RIRDLEGVSPQTCTPVEDGDTSVVFHIAHSALREVQILHDQLLDRFATGTLQPRDTIVMV
PEIGSFAPLIRATFDQYARDDARYIPYHIVDLRARDEQPVLQALDWLLRLPEQRCRQSEI
RDLLNCPALRRRFGWTLEDLPILQHWLAGAGWRWGLSAEQRAALGLPHCGPQNSGDFALQ
RLCLGYANGDDSHFAEIEAYGAAGGLDAALLGPLSQLLEKLEHWQHNLVEPLTPDRWGET
ARTLLTDFFSASDADDEVLLHHLEEALRLWQADCDAANFRATLPLAVFRGAWLEMLDAPD
LGRSFLGGGVTFCTLLPMRAVPYPLVCLLGMNEGDYPRRSPRPDFDLMALPGMARPGDRS
RRDDDRYLMLEALLAARQELYLSWTGRDQRNNQELAPSLLVAQLRDTIRDGWPLSEEARE
RHEKSVLEKRTFVHPLQPFSPDYLQNKQGLRTWSREWYPAPRTIVEDAGLPVPVEVTPRR
LDALLEFFRWPARAFYRQRLRTVFSAVDPAAEDDEPFTLDGLETYHLLDDLLKTTQKNGP
ACLAERVRAQQRSGRYPLAGLAAKTATTLLDEATPILTAWREIGAEWIATPQRRVITHTR
GQMWLADWLPTLYQNRSGDLAFVQLHAGRLLDKDGKTPDGGKLAALWLQQRLAAVIGLPC
GGILVGRDGVIRATPLEGDGTTLLDDLLDLWQEGLCQPLPVTLKTALARLRGKNPALIYD
GNEHLNGEVRQDLSLSRDYPDFATLSGTRTGPGQRGFAEYAEALYRPFADWLETLVWQTH
P
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcaggacatcgaaccgggcttcatcgtcctccatggcgaccgcctggagtgg
ctcagcgatgccgttctggagtggttgcacgaacacccgctgcaagcgttggaagaggaa
atttttctcgttcagagcaacggcatcgccgagtggctgcaatggaccctggcggcccat
gaaggtatctgcgcggcggtgcgcgtcaccctgccagggcgctttctctgggacagctat
ggacgggtgttgggtcaagacatcctccccgcccgcgcgccgctggacaaggcacccctc
acctggcgcctgatgcgcctcttgccggaactgctgcctcagaccgatttcgccccccta
cgacattttctggaccgggtggcgcagccggatggcgcgtcggagcggctttggcaaatg
gccgcgcagatcgccgatctcttcgaccagtatcaggtctatcgcggcgattggctcacg
gactgggccgccggccagtccctgctgcggcgcggtgacggcgagcgcatggccctgccc
gccggtcaaagctggcaaccccggctctggcaggcattacggcgcgacctgcaacagaac
ggaccggatcgggccctgggccgggcgcaggtgcatgaccggttcctcgccgccctgaac
gccgggcagcctcctgcggcaccgttgccccgccgcgtcacgctcttcggggcggccact
ctgccggaacagagcctgacggcgctggccgcgctgggacggcggatgcaggtgattctg
gcggtacccaacccttgtcgctatcactgggccgacatcgtttccgggcgcgaactgctg
cgtcgcgaacgccgccgccagcctctgcgccacggtcgcgatctctcaaacaccgcgccg
gaagacttgcatcagtttggcaatccgctcctcgccgcctggggtcgtcagggtcgtgac
tttctcaatctgttggaccagtgtgacgaaacgatgacgctgcggcagcagagcagcctt
ccacgtatcgatcttttcagcgaggatcggggcgacactctcctgcgtcagttgcaggtc
cgcatccgtgatctcgaaggcgtcagtccgcagacctgcacgccggtagaggacggagac
acctccgtggtctttcacatcgcccacagtgcgttgcgcgaggtgcagattctccacgat
caattgctggatcgtttcgccaccggcacactgcaacctcgcgacaccatcgtcatggtg
ccggagatcggcagcttcgcccccttgattcgcgccactttcgatcaatacgcgcgggac
gatgcgcgttacatcccttaccacatcgtcgacttgcgggcccgcgacgagcagcccgta
ctccaggctctggactggttgttgcgcttgccggagcagcgctgtcgacagagcgaaatc
cgcgatctcctcaactgccccgccctgcgtcgacgcttcggatggacgttggaagacctg
cccatcctccagcactggctggccggcgcgggttggcgctggggcctttcggcggaacag
cgcgccgcgctgggtctgccccattgcggaccccagaatagcggcgactttgccctgcag
cgcctctgtctcggctacgccaacggcgacgacagtcatttcgcggagatcgaagcctac
ggtgcggcgggcggactggatgccgcgctcctcggacccctcagtcaactattggaaaaa
ctggagcactggcagcacaatttggtcgagccgctgacgccggaccgctggggcgagacc
gcccgcaccctgctcaccgacttcttcagcgccagcgatgccgacgacgaagtcctgctg
catcatctggaagaagccttgcgcctatggcaggcggactgcgatgcggcgaatttccgc
gcaacgctccccctcgccgtgtttcgcggcgcctggctggagatgctggacgcaccggat
ttggggcgtagctttctcggcggcggcgtcaccttctgcacccttctgcccatgcgcgcc
gtaccctatccgctggtctgcctgctcggcatgaacgagggggattatccccgacgcagc
ccgcgtccggatttcgatctcatggccctgcccggcatggcccgccccggtgaccgctcc
cgtcgcgacgacgatcgttatctgatgctggaggcgttgctcgccgcccggcaggaactg
tacctcagttggacggggcgggatcagcgcaacaaccaggagttggcgccctccctgctg
gtggcccagttgcgggacaccattcgcgacggctggccgctgtccgaagaagcacgggaa
cgtcacgaaaaaagcgtgctggaaaaacgcaccttcgtccatccgctccaacccttcagt
ccggactatctgcaaaacaaacaagggctgcgcacctggtcccgcgaatggtacccagca
ccacggacgatcgtggaagatgccggactccctgtcccggtggaggtcaccccgcggcgc
ctcgacgcactgctggagtttttccgctggccggcgcgcgccttttatcggcaacgcctg
cgtaccgttttcagcgcggtggatccagcggcggaagatgacgaacccttcaccctggat
ggcctcgaaacctaccatctgcttgacgacttgctcaagaccacgcaaaaaaacggccct
gcgtgccttgccgaaagggtgcgggcgcagcaacgcagcggccggtatccgctcgctggt
ctggcggcgaaaaccgcaaccacgctgttggacgaggccacccccatcctcaccgcctgg
cgggagatcggcgcggaatggatcgcaacaccccaacgacgagtcatcacccacacccgc
gggcaaatgtggctggcggattggttgccgaccttgtaccaaaacaggtcgggagatctc
gccttcgtccagctccatgccggccgcctgctggacaaggacggcaagacccccgacggg
ggcaagctcgcggccctctggcttcaacagaggctcgccgccgtcatcggcctgccctgc
ggtggcattctcgtcggccgggacggggtcatccgcgccacgcccctggagggcgatggc
accacactgctggatgacctgctggacctctggcaggagggtctctgccaacccctgccc
gtcaccctcaaaaccgcgcttgctcgcctgcgggggaaaaacccggccctgatttacgac
ggcaatgagcacctgaacggcgaagtgcgacaggatctcagcctgtcgcgcgactatccc
gatttcgccacgctcagcggcacccgaaccggaccgggacaacgcggcttcgcggaatat
gccgaagccctttaccgccccttcgcggactggctggaaacgctggtgtggcagacgcac
ccatga
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integrated database retrieval system
