Acidithiobacillus ferrianus: GL267_008535
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Entry
GL267_008535 CDS
T10957
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
afh Acidithiobacillus ferrianus
Pathway
afh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GL267_008535 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afh03400
]
GL267_008535 (uvrB)
DNA repair and recombination proteins [BR:
afh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GL267_008535 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GL267_008535 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
AAA_30
DEAD
Kinesin
AAA_22
AAA_25
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
XRI67807
UniProt:
A0ACD5H6W8
LinkDB
All DBs
Position
complement(1691894..1693975)
Genome browser
AA seq
693 aa
AA seq
DB search
MVALVLSAAAVNVYLGDFDNPEQGMDKRFTLESGFPPQGDQPEAIRQLVSGLASGESFQT
LLGVTGSGKTFTMANVIAATHRPAIIMAPNKTLAAQLYAEMRAFFPHNAVEYFVSYYDYY
QPEAYVPSSDTFIEKDASINDHIEQMRLSATKALLERPDVIIVATVSAIYGLGDPAAYHD
MILHLRESGSMDQRAILKRLAEMQYSRNPLELKRGTFRVNGDVIDIWPAESEEEAVRVEL
FGDELERISLFDPLTGKTITRLARYTIYPKSHYVTPRETILAALASVKEELRQRLEALRH
ADKLVEAQRLEQRTRFDLEMMAELGYCSGIENYSRYLSGRMPGQAPPTLMDYLPRDALLF
IDESHVTIPQFGGMYKGDRSRKETLVEYGFRLPSALDNRPLMFNEFETLMPQTIFISATP
GPYELSHSGQVVEQVVRPTGLIDPQVEVRPAKGQVDDLVDEINETIRAGWRILVTTLTKR
MAEDLTDYLHDLGIKSRYLHSDIETVERVEIIRDLRAGVFDVLIGINLLREGLDMPEVAL
VAILDADKEGFLRSERSLIQTVGRAARNLHGRAILYADTITNSMARAMAETDRRRQKQVL
FNQEHGIVPRGVVKPVSDMIEGVYRRNAPPAARAAEKSADYRVPNDPKALTRHIKELEEH
MYRHARNLEFEQAAALRDTIKKLETHLLELDLP
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggtggccctggtcctttcggctgccgcggtcaacgtgtatcttggggatttcgacaat
ccggagcagggcatggacaagcgatttaccctggagagcggttttccgccgcaaggcgat
cagcccgaggccattcgccagttggtgagcgggttggcgtccggtgagtcttttcaaact
ttgctgggggtgacgggttcgggcaagaccttcaccatggccaacgtcattgccgcgacc
caccggcccgcaatcatcatggcgcccaacaagaccctggcggcgcagctctacgcggag
atgcgcgcgtttttcccccacaacgccgtggagtattttgtcagttattatgactattac
cagccggaagcttacgttccctcgtccgacaccttcattgaaaaagatgcctccatcaat
gatcacatcgagcagatgcgtctttccgccaccaaggccctgctggagcggcccgacgta
atcatcgttgctacggtttccgccatatacggtctcggcgatccggccgcctatcatgac
atgattttgcacctccgcgagtctggcagcatggatcagcgtgccatcctcaagcgcctt
gcagagatgcagtacagtcgcaatcctttggaactcaagcgtggcactttccgggtcaat
ggcgatgtcatcgatatctggcccgcggaaagtgaagaggaggcggtccgggtggagctc
ttcggggatgagttagagcgtatctctctcttcgatcccctcacgggcaagactattacc
cgcctggcccgctacaccatctaccccaaaagccactatgtcactccacgcgaaaccatt
ctcgctgcgcttgcatccgtcaaggaggagttgcgccagcggttggaagcgttgcgccat
gccgataagctggtcgaggcgcaaagactggaacagcgtacccgctttgatctggagatg
atggcggagctgggttattgctccggaatcgaaaactactcccgctatctctcggggcga
atgcccggtcaggcgcccccgaccctgatggactatctgccgcgcgatgccttgcttttc
atcgatgagtcgcatgtcacgatcccgcagttcggcggtatgtacaagggtgatcgctca
cgcaaggaaacactggtggaatacgggtttcgcctgccctcggcgctcgacaatcggcct
ctgatgtttaacgagtttgagacgctgatgccgcagaccatattcatctccgcgacacct
ggaccctacgagctgagtcattccgggcaggtggtggagcaggtggtgcggccaaccggc
ttgatcgatccgcaggtggaggtccgaccagcgaaaggtcaggtcgatgatttggttgat
gaaataaatgagacgattcgcgcgggctggcgtattctggtgacgacgctgacgaaacgg
atggccgaggatctgaccgattacctgcacgacctggggatcaaatctcgctacctccat
tccgatatcgagacggtggagcgggtggagatcatccgtgacctgcgggcgggtgtgttt
gacgtgctgatcggcatcaatctcttgcgggaaggtttggacatgccggaggtggcgctg
gtcgccatcctggatgccgacaaggagggattcttgcgctcggaacgctcgctgatccag
acggttgggcgggccgcgcgcaatctgcatggccgcgctattctctatgccgacacgatc
actaattccatggcgagagccatggcggagaccgatcgtcgtcgccaaaaacaggtgctt
ttcaatcaggagcacggcattgtgccgcgtggcgtcgtcaagccggtgtccgatatgatt
gaaggggtctatcggcgcaatgccccgccagccgcgcgggcagcggaaaagtctgccgat
tatcgcgtgcccaatgatccgaaggctctcaccaggcatatcaaagagttggaagagcat
atgtatcgccacgcgcgtaacctggaatttgaacaggcggcggcgctacgcgacactatc
aagaagctggaaacacacttgctggagttggatctgccttga
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integrated database retrieval system
