Acidithiobacillus ferrianus: GL267_009010
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Entry
GL267_009010 CDS
T10957
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
afh Acidithiobacillus ferrianus
Pathway
afh03030
DNA replication
afh03430
Mismatch repair
afh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GL267_009010 (dnaE)
03430 Mismatch repair
GL267_009010 (dnaE)
03440 Homologous recombination
GL267_009010 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afh03032
]
GL267_009010 (dnaE)
03400 DNA repair and recombination proteins [BR:
afh03400
]
GL267_009010 (dnaE)
Enzymes [BR:
afh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GL267_009010 (dnaE)
DNA replication proteins [BR:
afh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GL267_009010 (dnaE)
DNA repair and recombination proteins [BR:
afh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GL267_009010 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XRI67896
LinkDB
All DBs
Position
complement(1783738..1787238)
Genome browser
AA seq
1166 aa
AA seq
DB search
MSAPQFVHLHVHSEYSLEDGIIPVKALARRCAERDMPAVAITDHGNLFALVKFYNAARGQ
GVKPVIGSEIWIHDPVEPERPASLVLLCMNKVGYGNLSRLLSRAYLEGNRSGRPQIDAAW
LEGRSDGLIALSAAGQGEIGRALPRDPERAEKRARVYAELFPERFYLEIQRNGETDQEAL
VRATVALASRLELPLVATNNAHFLDAEDFAAFDARQCIAAGYALDDARRPRRFTPEHRLP
DPQEMRLRFEDLPEACENTVEIARRCNLELILDQYALPDYPIPAGQSVDDYLHEAAQQGL
HARLRELNISGKAVLPYQERLLREVRVIQQMGFPGYFLIVADFIQWAKNNGVPVGPGRGS
GAGSLVAYALHITDLDPIGNGLLFERFLNPERVSMPDFDVDFCMDQRDRVIQYVADKYGR
DRVGQIITFGTMKARAVVRDVGRVLGLPYGFVDQLAKLVPGDLGMTLAKALEESEELRRR
QAEEDDVRELLDIALRLEGLPRHASTHAGGVVISPEPLADRLPLFSDGSEGGGNVTQLDK
DDVEKMGLVKFDFLGLRTLTIIDMAVKLINADAAACGREPLNIQRLPLNDPATFALLKST
ETAAVFQLESSGMRDLVRRLQPDTFEDIVALVALFRPGPLQSGMVDDFIARKHGKAQVTV
LHPDLAPILKETYGVIVYQEQVMQAAQVLAGYSLGSADLLRRAMGKKKPEEMAQQRAIFL
AGARKNGLAEAQAGAIFDLMEKFAEYGFNKSHSAAYALVSYQTAYLKAHYPQFFMAAVLT
ADMDHTDKVVAMIAECTRMGLHIAPPSIQRSVLEFRPEGERDIRFGLGAVKGLGRAAVHA
MLSAREEGSFEGLFDLLCRVDAQKINRRALDALIRAGAMDDWGTSRASLAASVDSCIEAA
AQFQNGQLSQQESLFSGQEALPAAPPLVLCEPWSLAETLRQERETLGFYLSGHPMDSLRD
DLAALGAVPLAGIRAGTTVLVAGLVVARRSTRTKRGDRIYFLTLDDGLGRLEVVVFAEVW
AQAGKVGEGEEPVLVLGEAGEDSYSGGLRLSALRVLNMTAARAELAIQLTMELDATATLA
PQDLLAVLRAYPGATGLRLRLRIGDDVMAQLRVGEGLGFAAVPDCVAALTALAPTARWSW
DYRPASILVNNVTPLERARQSARRPA
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgctccccagtttgtccatttgcatgtgcattccgagtactccctggaggacggg
atcattccggtcaaggccctggccaggcgctgcgccgagcgggatatgccggcggtggcc
atcaccgaccacggtaacctctttgcgctggtaaaattttacaacgcggcccgggggcag
ggcgtcaaaccggtgatcggcagtgaaatctggattcatgatcccgtggaaccggagcgt
ccggccagcctggtgctgctttgcatgaataaagtcggttatggcaatctcagtcgtctg
ctgagccgggcctacctggaaggtaatcgaagcgggcgtccgcagatcgatgcggcatgg
ctggaagggcggagtgacggcctcatcgccctgtcggcagccggacagggcgaaatcggg
cgcgctcttccgcgcgatccggaacgggccgaaaagcgtgcgcgggtgtatgccgaactc
tttcccgaacgcttttatctggagatccaacgtaatggcgagacggaccaggaagcgctg
gtacgggccacggtggcgctcgcgagcaggctggagttaccgctcgtagccaccaataac
gcgcactttctcgacgcggaggattttgcggccttcgatgcgcggcagtgcatcgcggcg
ggctatgccctcgacgatgcgcggcgtccgcgccgttttacgccggagcaccggttgccg
gacccgcaggaaatgcgattgcgcttcgaggatttgccggaggcctgtgaaaacaccgtg
gagatcgctcgccgttgcaatctggaactgatacttgaccaatatgccctcccggattat
cccatccccgcaggtcagtccgtggatgattatctgcacgaagcggcccaacagggcctc
cacgcgcgtttgcgggagttgaacatcagcgggaaggcggtgttgccttatcaggaacgg
ctcttgcgcgaggtgagggtcatccagcaaatgggttttcccggttacttcctcatcgtt
gccgactttatccagtgggctaaaaacaatggcgtccccgtaggtcccgggcgcggttcc
ggcgccggatcattggtggcctatgcactgcacatcaccgatctcgatcccattggcaat
ggcctgctgtttgaacgctttctgaatcctgagcgggtgtccatgcccgacttcgatgtg
gatttctgcatggaccagcgggaccgcgtgattcaatatgtggcggacaaatacgggcgg
gaccgggtcgggcagatcatcaccttcgggaccatgaaagcgcgggcggtggtgcgtgac
gtgggacgggtgctgggtttgccttacggcttcgtggaccagttggccaaactggtgcct
ggcgatctgggtatgactctggccaaagccctggaagaatccgaagaactgcggcggcgg
caggccgaagaagatgacgtccgggagttgctggatatcgccctgcgtcttgaaggcctg
ccgcgtcatgcctccacccatgccgggggggtggtgatttcaccggagcccctggccgat
cgtctcccgctcttcagtgacggttccgaaggcggcggcaatgtcacccagctggataag
gatgacgtggagaagatggggctggtgaagtttgatttccttgggttgcggaccctgacc
atcatcgatatggcggtcaaactgatcaatgcggacgccgcagcctgtggacgggagccc
ttgaacattcagcgcttgcctttgaacgacccggccacgttcgcgttgctgaaatccacg
gagacggcggcggtcttccaactggagtcctcgggaatgcgcgatctggtgcgccgtctg
caaccggatacattcgaggatattgtcgccctcgtggcactattccggcccggacccctg
caatcgggtatggtggacgacttcatcgcccgcaaacacggcaaggcgcaggtgaccgtt
ctccacccggatctggcaccgattctgaaggaaacctacggggtgatcgtctaccaggag
caggtgatgcaggccgcgcaggtgctggcgggttattccctggggagcgccgatctgctg
cgtcgggccatgggcaagaaaaaaccggaagaaatggcccagcagcgggcgatttttctg
gccggcgcccgcaaaaacgggctggcggaagcacaagccggggccatcttcgatcttatg
gaaaagtttgcggaatatggtttcaacaaatcccattcggcggcctatgccttggtgtcc
tatcagacggcttatctgaaggcccactatccccagtttttcatggcggcggtgctcacc
gccgatatggaccataccgacaaggtggtggcgatgatcgccgagtgcacgcggatgggt
ttgcacatcgcaccgcccagcatccagagaagtgtcctggagttccggccggagggcgag
cgtgatatccgctttgggctcggtgctgtcaagggacttggacgcgcggccgttcatgcc
atgctcagcgcccgggaagagggatcctttgaaggtcttttcgatttgctctgccgggta
gacgcgcagaaaatcaaccggcgcgccctggacgccttgattcgcgcgggggccatggat
gactggggcacgtcgagagccagtctggccgcctcggtggacagttgcatcgaggcggcg
gcgcagtttcagaatggccagttgagtcagcaggagtcgttattcagtggacaggaggcg
ctgccggcggccccgccgctggtgctttgcgaaccctggagccttgctgaaaccttgcgt
caggaacgagaaaccctgggtttctacctgagtggtcaccccatggatagtctgcgggat
gacctggcagcgttgggggccgtacccctggcgggcatccgtgccggaaccaccgtgctg
gtggctgggctggtggtggcacggcgcagcacccggaccaagcgcggcgaccgtatttat
tttctgaccctggacgatggtctgggccgcttggaagtggtggtttttgcggaggtctgg
gcacaggcaggtaaagtcggcgagggcgaggagccggtactggtgttgggcgaagcggga
gaagacagctactccggaggcttgcgcctcagcgcattgcgggtgctgaacatgactgcg
gcccgtgccgaattggccatccaactgaccatggagttggatgccacggccacactggca
ccgcaagacctgcttgcggtactccgcgcgtatcccggcgccacggggctgcgcctgcgt
ctgcgtatcggtgacgatgtgatggcccagctgcgcgtgggggagggtctgggattcgcc
gctgtccccgactgtgttgcggccttgactgcattggcgcccacggcccgctggagttgg
gactaccgacccgcctcgattctcgtcaataatgtcacccccttggaacgcgcccggcaa
tcggcgcggcgtccggcctga
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