Acidithiobacillus ferrianus: GL267_011600
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Entry
GL267_011600 CDS
T10957
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
afh Acidithiobacillus ferrianus
Pathway
afh02024
Quorum sensing
afh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GL267_011600 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GL267_011600 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afh03019
]
GL267_011600 (hfq)
03036 Chromosome and associated proteins [BR:
afh03036
]
GL267_011600 (hfq)
Messenger RNA biogenesis [BR:
afh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GL267_011600 (hfq)
Chromosome and associated proteins [BR:
afh03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
GL267_011600 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Motif
Other DBs
NCBI-ProteinID:
XRI68391
LinkDB
All DBs
Position
complement(2318182..2318466)
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AA seq
94 aa
AA seq
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MAGQQKGQILQDPFLNLLRKEHVPVAIYLVNGIKLQGFVESFDQFVVLLRNNVSQMIYKH
AISTVVPGRDVRLPLPEGETEGVAEVKERPDSGQ
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggccggacaacaaaaaggacagatcctccaggatccctttctcaatctgttacgcaaa
gagcacgtgcccgtcgcaatttatctggtgaacgggatcaagctgcaagggtttgtggaa
tctttcgaccagtttgtcgtattgctgcgcaataatgtcagtcagatgatttataagcat
gctatttccaccgtggtgcccggtcgtgatgtacgtttgcccttgcctgaaggggaaacc
gagggcgttgcagaggtgaaggagcggcctgattctgggcaatag
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