KEGG   Acidithiobacillus ferrianus: GL267_011600
Entry
GL267_011600      CDS       T10957                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
afh  Acidithiobacillus ferrianus
Pathway
afh02024  Quorum sensing
afh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:afh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GL267_011600 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GL267_011600 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afh03019]
    GL267_011600 (hfq)
   03036 Chromosome and associated proteins [BR:afh03036]
    GL267_011600 (hfq)
Messenger RNA biogenesis [BR:afh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     GL267_011600 (hfq)
Chromosome and associated proteins [BR:afh03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    GL267_011600 (hfq)
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: XRI68391
LinkDB
Position
complement(2318182..2318466)
AA seq 94 aa
MAGQQKGQILQDPFLNLLRKEHVPVAIYLVNGIKLQGFVESFDQFVVLLRNNVSQMIYKH
AISTVVPGRDVRLPLPEGETEGVAEVKERPDSGQ
NT seq 285 nt   +upstreamnt  +downstreamnt
atggccggacaacaaaaaggacagatcctccaggatccctttctcaatctgttacgcaaa
gagcacgtgcccgtcgcaatttatctggtgaacgggatcaagctgcaagggtttgtggaa
tctttcgaccagtttgtcgtattgctgcgcaataatgtcagtcagatgatttataagcat
gctatttccaccgtggtgcccggtcgtgatgtacgtttgcccttgcctgaaggggaaacc
gagggcgttgcagaggtgaaggagcggcctgattctgggcaatag

DBGET integrated database retrieval system