Acidithiobacillus ferrianus: GL267_013965
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Entry
GL267_013965 CDS
T10957
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
afh Acidithiobacillus ferrianus
Pathway
afh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
afh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GL267_013965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
afh02022
]
GL267_013965
02035 Bacterial motility proteins [BR:
afh02035
]
GL267_013965
Two-component system [BR:
afh02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
GL267_013965
Bacterial motility proteins [BR:
afh02035
]
Pilus system
Twitching motility proteins
GL267_013965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
VpsR
Motif
Other DBs
NCBI-ProteinID:
XRI68841
LinkDB
All DBs
Position
complement(2793413..2794768)
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AA seq
451 aa
AA seq
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MMADLSTLPPALVVDDEPNIVELLAITLQGMGLAVIGAHSIAEAYARLGEATPSLCLTDL
RLPDGSGIELVRRLHASHPQVPVAVITAYSSADGAVEAMQAGAFDYMAKPIELARLRRLV
AQAVALSCPSPTETDGTRRLLGDSPVMQRLREDIRRVARSNAPVHITGESGTGKELAARA
IHASGPRHDKPFVAVNCGAIPDGLLESELFGAEKGAYSGAVQRREGLFVAANGGTLFLDE
IGDLPMMMQVKLLRAIQERSIRPLGSSREIALDVRIISATHRDLQEMVNDGSFRQDLRYR
LDVVKLHMPPLRERLEDIPQLVEAILQRIGATPGGPPPRLPAGMLERLRLYTFPGNVREL
ENLLERSLALQHETFLPEEIFAVPGAAPADNAAPAPASGVAPASMDTAEAVLLRKILEQA
GGDRHQAARLLDISLQSLEMRLHRLQVKEDA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgacctgtctactttgccccccgcgctcgttgtcgatgacgaaccgaacatt
gtcgaactgctggctattacgctgcagggcatggggctcgcggttatcggtgcccactcc
atcgcagaagcctacgcgcgtctgggcgaagccaccccgtctttgtgcctgacggatctg
cgcttgccggatggttccggcattgagctggtacgtcgtctgcacgcatcacatccccag
gtgcccgtcgcggtgatcaccgcctattcttccgcggatggcgcggtggaggccatgcag
gccggggctttcgactacatggccaagcccatcgagctggcgcggttgcggcggttggtg
gcgcaggcggtggccttgagctgcccgtcccccaccgagacggatggtacccggcgattg
ctgggcgactcccccgtcatgcagcggctacgcgaggatattcgccgggtcgcgcggagc
aacgcgccggtccatattaccggcgagtcgggaacaggcaaagaactggcggcgcgggcc
atccatgcctcgggaccgcgtcacgacaagccgtttgttgccgtgaattgcggcgccatc
cccgatggcctgctggagagtgaacttttcggcgccgaaaagggggcgtattccggcgcg
gtgcaacgccgggagggactcttcgtggcggctaacggcggcacgcttttcctcgatgag
attggcgacctgcccatgatgatgcaggtgaaactcctgcgcgccattcaggagcgttcc
atacgaccgctgggatcatcccgggaaatcgctctggacgtgcggatcatctcagccacc
caccgcgatctacaggagatggtgaacgacggcagcttccgtcaagatctgcgttaccgg
ctggatgtggtgaagctgcatatgcctccgctgcgcgagcgtctggaggatatccctcag
ttggtcgaggcgattctccagcgtatcggcgctacgccgggtggacctccgccccggctt
cccgcgggcatgttggagcgattgcggctctatacctttccgggtaacgtgcgcgaactc
gaaaacctcctggagcgtagcctcgccctacagcacgaaacgttccttcccgaagaaatt
tttgctgttcccggtgccgccccggctgacaacgcggcgccggctccggcatccggggtg
gcgccggccagtatggataccgccgaggccgttttgctgcgcaagatactggagcaggcc
gggggcgaccggcatcaggctgcgcgcttgttggacatcagcctgcaatccttggaaatg
cggttgcaccgattgcaggtgaaagaggacgcatga
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