Acidithiobacillus ferrianus: GL267_015095
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Entry
GL267_015095 CDS
T10957
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
afh Acidithiobacillus ferrianus
Pathway
afh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GL267_015095 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afh03400
]
GL267_015095 (ruvB)
Enzymes [BR:
afh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GL267_015095 (ruvB)
DNA repair and recombination proteins [BR:
afh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GL267_015095 (ruvB)
RecFOR pathway proteins
GL267_015095 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
nSTAND3
AAA_16
AAA_22
Mg_chelatase
AAA_3
TsaE
DUF815
RNA_helicase
AAA_33
IstB_IS21
ABC_tran
NACHT
NTPase_1
AAA_14
AAA_17
AAA_28
NB-ARC
AAA_18
Rad17
AAA_24
AAA_25
AAA_19
Sigma54_activ_2
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
XRI69047
LinkDB
All DBs
Position
3018876..3019901
Genome browser
AA seq
341 aa
AA seq
DB search
MMDRGPLNPQEAHDDAIDHALRPRRLAEYLGQAKLRESLGLYIEAARRRSEALDHVLLFG
PPGLGKTTLAHIIAQEMGAGLKVTSGPVLDKPGDLAAILTNLQPRDVLFVDEIHRLSPVV
EEILYPALEDYALDILIGEGPAARSIKINLPPFTLIGATTRAGLLTSPLRDRFGISFHLE
FYSDAELTQIVTRSAQILSTPQALEGAQEIARRARGTPRIANRLLRRVRDYAQVRGNGEI
DGATAQAALTLMEVDQHGFDGQDRKLLQAVISRFAGGPVGVESLAAALGEERGTIEDVLE
PFLIQRGYLIRTPRGRCATELSYLALGLTAPKAPGELFDAL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgatggatagaggccccctcaaccctcaggaagcccacgatgatgcgatagatcatgcc
ctgcgtccgcgacggctcgcggaatatctcgggcaggccaaattgcgcgaatcactgggc
ctctatattgaagccgcccggagacgcagcgaagcattggatcatgtgctgcttttcggt
ccgcccgggctcggcaagaccaccctggcccatatcatcgctcaggagatgggcgccggt
ctcaaggtcacctcgggaccggtgctggacaaaccgggcgatctcgcggccatcctcacc
aacctgcagccgcgcgacgtgcttttcgtggatgaaattcatcgcctcagcccggtggtg
gaagaaatcctctacccggcgctggaagactacgcgctcgacatcctcatcggcgaagga
cccgcggcgcgctccatcaaaatcaacctgccgcccttcaccctgatcggcgccaccacc
cgtgcaggtctgttgacctcgccgctgcgggaccgcttcggcatcagttttcatctggaa
ttctacagtgacgccgagttgacgcagatcgtcacccgctccgcccagattctcagcacc
ccccaagccctggaaggcgcgcaggaaatcgcccggcgcgcccggggaaccccgcgcatc
gccaaccgcctgctccgccgggtgcgggactatgcccaagtacgggggaacggcgaaatt
gacggagcaacggcacaggcggcgctgaccctcatggaggtcgatcagcatggatttgac
ggccaggaccgcaagttgcttcaggccgtcatctcccgttttgccggtggacccgtgggc
gtggagagtttggcggccgccctcggtgaggagcgcggcaccatcgaagacgtactggag
cccttcctgattcagcgcggttatctgattcgcacgccgcgcggacgctgcgccaccgaa
ctcagctatctcgccctgggtctcacggcccccaaggcgcctggggaattgttcgatgcc
ctctaa
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integrated database retrieval system
