Acidithiobacillus ferrivorans: Acife_0011
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Entry
Acife_0011 CDS
T01595
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
afi
Acidithiobacillus ferrivorans
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afi03032
]
Acife_0011
03400 DNA repair and recombination proteins [BR:
afi03400
]
Acife_0011
Enzymes [BR:
afi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Acife_0011
DNA replication proteins [BR:
afi03032
]
Prokaryotic type
DNA Topoisomerases
Acife_0011
DNA repair and recombination proteins [BR:
afi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Acife_0011
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
CoiA_N
Motif
Other DBs
NCBI-ProteinID:
AEM46254
LinkDB
All DBs
Position
complement(13301..15886)
Genome browser
AA seq
861 aa
AA seq
DB search
MAYQLVIVESPAKAKTIQKYLGDDFQVLASYGHVRDLQPKEGAVDTEHDFAMRYAAIERN
ERHVDAITKALRGAEKLWLATDPDREGEAISWHLVELLRERHLLGNMPTQRVVFHEITKK
AVQEAIANPREIAMDLVNAQQARRALDYLVGFNLSPLLWRKVRPGLSAGRVQSAALRLIC
ERENEIEAFVSREYWTIASHLQQAGSDFSARLTHWQDKKLEQFDVTESDQAAAIRSGMED
DLSRQPLRVREVERKSRQRQPAAPFTTSTLQQEASRKLGFNASRTMRVAQQLYEGINIGN
ETVGLISYMRTDAVNLAEEAIASIRDFIGGHYGGEFVPETPRRYKTKTKNAQEAHEAIRP
TDIARTPEALQGVLERDLWRLYDLIWKRSIACQMAPARMDLVAVDMDAGTHWTLRANGST
VTFPGFMAVYQEGKDDGDEDEGNRILPPLNTGDEPQVLDINPEQHFTEPPPRYSDATLVK
TLEAHGIGRPSTYASIIQTLQNREYVAVEQRRFRPTDLGRVVGRFLTNHFERYVDYGFTA
SMEDELDAISRGEKQWQPVLSAFWGPFRALLDEKANVSRTEATSEALDEACPQCGKPLFL
RLGRHGRFVACSGYPECNYTRPVDGPREPAEPVGRDCPDCGKPLVYKTGRYGRFISCSGY
PECKHIEPLTQPKSSGVTCPECGEGELVEKRSRYGKIFYSCNTYPKCNYALWGPPVARAC
PRCAWPIMIEKSGKRLGEQLACPQSECAFHFPANASDTEIAAMLSDYTPPPPREKRAPPA
KKAAPARKAAAKSTRKPAVKAATAANKPAKAETTAAVVKKPSKAKTPAAKKSTSSKNTTS
SASEAATPAARKRSVKNVTNS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggcatatcagctcgttatcgttgaatcaccggctaaagccaaaaccatccagaagtat
ctgggggatgactttcaagtgctcgcctcctacggccatgtacgcgatttgcagcccaaa
gagggtgctgtagataccgaacatgatttcgccatgcgctacgctgccatcgagcgcaac
gagcgccatgtggacgccatcactaaggccctgcgcggcgccgaaaaactttggctcgcc
accgatccggatcgcgaaggcgaagctatctcctggcatctggtggagctgctgcgcgag
cgtcacctgctcggcaacatgcccacgcaacgcgtcgtcttccacgaaatcaccaaaaaa
gccgtgcaggaagccattgccaacccccgcgaaatcgccatggatctggtcaacgcccag
caagcgcgccgcgccctcgattatctggtgggcttcaatctgtcgccgctgctctggcgc
aaggtgcgtccgggcctctcggcgggccgggtacaaagtgctgccctgcgcctgatctgt
gagcgcgaaaatgaaatagaagcctttgtcagccgcgaatactggaccatcgccagtcac
ctgcagcaggccggtagtgatttcagtgcacgcctgacgcactggcaggacaaaaaactc
gaacagttcgacgttacggaaagtgatcaagccgcagcgatccgcagcggtatggaagac
gatctcagccgccaaccgctacgggtccgggaagtggaacgcaagagccggcagcgccag
ccggcagcacccttcaccacctccaccctgcagcaggaggcctcgcgcaagctcggcttt
aacgccagccgtactatgcgcgtcgcccagcagctctacgaaggcatcaatatcggtaac
gaaacggtaggccttatcagttacatgcgtaccgatgccgtcaatcttgccgaagaggcc
atcgcttctatccgcgactttatcggcggccactacggcggcgaattcgtccccgaaact
ccgcgccgctacaagaccaagaccaaaaacgcccaggaagcccacgaagccatccgcccc
acggacatcgcccgcaccccggaggccctgcagggcgtgctcgaacgcgacctctggcgc
ctttatgatctgatctggaagcgcagcatcgcctgccaaatggcgcctgcgcgtatggac
ctggtcgctgtcgatatggacgctggcacccactggaccctgcgcgccaacggctccacc
gtcacctttccgggcttcatggccgtctatcaggaaggcaaggatgacggtgacgaggac
gagggcaaccgcattctgccgcccctcaataccggcgatgaaccgcaggtgctcgacatt
aatcccgagcagcactttaccgagccccccccccgttacagcgatgctaccctggttaaa
accctggaagcccatggcatcggccgtccatccacctatgccagcattattcagaccctg
cagaaccgcgaatatgtcgccgtcgagcagcgccgcttccgccccaccgatctcggacgg
gtggtcggccgtttcctgaccaaccatttcgagcgctatgtggattatggcttcaccgcc
agcatggaagatgagctggacgccatttcccggggtgagaagcagtggcagccggtgctc
agcgcgttctggggaccctttcgcgcactccttgacgaaaaggccaacgtcagccgcacc
gaagccaccagtgaagcgctggatgaagcctgtccacaatgtggcaaacccttattcctg
cgccttggccgccatggccgttttgtggcctgttcggggtatcccgaatgtaattatacc
cgcccggtggacggccctcgcgaacccgccgaacccgtaggccgcgactgcccggactgc
ggcaagccgctggtctataaaaccgggcgttatggccgctttatctcgtgcagcggctat
cccgaatgtaagcacatcgagcccctaacccagcctaaatcctcaggagtcacttgccct
gagtgcggtgaaggcgaactggtagaaaaacgcagccgctacggcaaaatcttctactcc
tgtaacacctaccccaaatgcaattatgcgctttggggacccccggtagcacgcgcctgt
ccccgttgcgcctggccgataatgatcgaaaaaagcggcaagcgtctcggtgaacagctc
gcctgtccccagagcgaatgcgcctttcatttcccggcgaacgccagcgacacggaaatt
gccgccatgctgtctgactacaccccgccaccgccccgcgaaaagcgggcacctcccgcc
aaaaaagcggctcctgcccgtaaggctgcggcgaaaagcaccaggaaaccggccgtgaaa
gcggcaactgctgctaacaagcctgcaaaagcggaaacaacggccgccgtggtaaaaaaa
ccaagcaaagccaagaccccggcggcaaagaaaagcacctcgtccaaaaatacgacctca
tcagccagcgaagcggccacgcctgcagcacggaagcgctctgtaaagaacgtcaccaac
tcatga
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