Acidithiobacillus ferrivorans: Acife_0322
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Entry
Acife_0322 CDS
T01595
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase rumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
afi
Acidithiobacillus ferrivorans
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afi03009
]
Acife_0322
Enzymes [BR:
afi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Acife_0322
Ribosome biogenesis [BR:
afi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Acife_0322
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
TRM5-TYW2_MTfase
TRAM
Methyltransf_15
Methyltransf_31
MTS
Methyltransf_11
Methyltr_RsmB-F
RrnaAD
Cons_hypoth95
UPF0020
PrmA
CMAS
Methyltransf_23
PCMT
Motif
Other DBs
NCBI-ProteinID:
AEM46551
UniProt:
G0JS43
LinkDB
All DBs
Position
342627..343949
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AA seq
440 aa
AA seq
DB search
MSRPKPIHNAQPEQVFIESLDAEGRGIARVEGKVLFVDGALPGERVWARRTQNHKSFDRA
ELLQVVKASSLRVSPPCPHFGICGGCSLQHLEPAAQVAIKQRQLEDNLWRIGKVRPGRVL
PPIHGPSLGYRSKARLSVRTPKTRGALVGFRERNSSYVVDMGQCLTLDPRIGQRILPLRA
LIGQMQSPQDFPQIEVAATPDAVALVFRHMRPLAESDLQHLRAFGVQHDLQIWLQPRGPE
TLHPLWPEQPEPLHYDLPDYQLRLRFDPLVFTQVNQAANQVMVRRAMALLQPQPGEQILD
LFCGLGNFTLPIARLGAQVLGIEGDARLVALATENAVANGLADKARYAVADLTQAQMEDF
APAGAIDKILIDPPRSGAIEVLRSLTPGVRRLVYVSCNPATLARDAAYLVHERGYHLQAA
GVVNMFPHTAHVESIALFAR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtcccaagcccattcataacgctcagcctgagcaggtgtttatcgaaagtctg
gatgccgaaggacgcgggattgcccgtgtggagggcaaggtgctttttgtcgatggagcg
ctgcccggcgagcgggtctgggcacggcgtacccagaaccacaagagctttgatcgtgcc
gagttgctgcaggtggtcaaggcatcctccctgcgggtgtcgccgccttgtccgcacttt
ggcatctgcgggggctgcagcctgcagcatctggagccagcggcgcaggtggctatcaag
caaagacaactggaagataatctctggcgcatcggcaaggtccgccccggacgcgtcctg
ccccccattcatggcccgagcctgggctatcgcagcaaggcacgactctcggtgcggacg
ccaaaaacccggggcgcactggtcggtttccgcgaacgcaacagcagttatgtcgtggat
atggggcaatgtctgacccttgacccgcgcatcgggcaacgcattctgcccctgcgggcg
ctgatcgggcagatgcaatcgccccaggattttccgcagattgaagtggccgctacgccg
gatgcggttgctctggtgtttcgccacatgcggccgctggcggaaagcgatctgcagcac
ttgcgtgcttttggtgtgcaacacgacctgcagatatggttgcagccgcgcgggccggag
accctgcatcctttatggccggagcagccggaacccctgcattacgacctgccggattat
cagttgcgcctgcgttttgatccgctggtcttcactcaggtcaaccaggcggcaaatcag
gtgatggtgcgccgcgccatggcgctgctgcagccgcaaccgggggagcagatcctggat
ctgttctgcggactcggaaattttaccctgcctattgcccgattgggagcgcaggtgctt
ggcattgaaggggacgcccggttggtcgcgctggccaccgagaatgccgtcgccaatggc
ctggcggataaagcccgatatgccgtagccgatctcactcaggcgcagatggaagatttt
gctccggcgggcgccatcgacaaaatactcatcgacccgccccgcagtggcgctattgaa
gtgctgcgcagtctgacccccggcgtccgccgcttggtgtatgtctcctgcaatccagcg
accctggcccgtgatgcggcgtatctggtacacgaacgcggttatcatctgcaagcggct
ggcgtcgtcaacatgtttccccataccgcccatgtcgaatccatcgccctcttcgcgcgc
tga
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