Acidithiobacillus ferrivorans: Acife_0386
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Entry
Acife_0386 CDS
T01595
Name
(GenBank) DNA repair protein and transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
afi
Acidithiobacillus ferrivorans
Pathway
afi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Acife_0386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afi03000
]
Acife_0386
03400 DNA repair and recombination proteins [BR:
afi03400
]
Acife_0386
Enzymes [BR:
afi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Acife_0386
Transcription factors [BR:
afi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Acife_0386
DNA repair and recombination proteins [BR:
afi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Acife_0386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AEM46610
UniProt:
G0JSQ3
LinkDB
All DBs
Position
complement(403611..405089)
Genome browser
AA seq
492 aa
AA seq
DB search
MNTSDLNREVCYRAVLARDARFDGKFYTAVLSTGIYCRPVCPARPPKLENCLFVPSTAVA
RQLGFRACLRCRPELVGAEPFAEASALMVSRALQQMSDDGALNGTNLDEVAVQLGVSGRH
LRRLFVRVLGSPPTALAQMQRILLAKKLIAETGLSMTDVALAAGFGSVRRFNAVMQRHCG
CAPGVLRHTSASKSDMAAGITMKLPYTPPYDWAALLEFLAGRAIPGVEAVQSGQSGQYWR
SFQLEGTQGLVEVHPDPANDQLLATIHATKTPPIGIIVARLRRLFDLDTEIIRIDQHLST
DPLMASRVRARPGLRVPGAWDLFELTVRAILGQQISVAAATTLSGRLVAALGGSLTEEMA
LLSDGTGISRIFPTPAAVMAADLGSIGLTRAREKALQTLAVAMQEGRLAFSAHTLDSIIK
NLCELPGIGPWTAHYIAMRGYRDPDAFPHSDLGLLRALETESGRPSPTEMLMLAEAWRPW
RAYAAMRLWAQP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatcggacctgaatcgcgaagtgtgctaccgcgccgtcctggcaagggacgca
cggtttgacggcaagttctacacggcggtgttatccacgggcatctattgccgtccggta
tgtcccgcacgcccccccaagctggaaaattgcctctttgtgcccagcactgcggtagcc
cggcagttgggcttccgagcctgtttgcgttgtcgccccgagttggtaggggccgaacct
ttcgcagaggccagcgccctgatggtttctcgagctttgcagcagatgagtgatgacggt
gccttgaatggcaccaatttggatgaggtggctgtgcaattaggtgttagcggacgacat
ttgcggcgactgtttgtgcgcgtgctcggcagcccgccgacggctctggcgcagatgcag
cgcattctgctggccaaaaaactgattgcagaaaccggactttccatgaccgatgtcgca
cttgctgcaggatttggcagcgtccgccgtttcaatgcggtcatgcagcgccattgtggg
tgtgcacccggcgtactgcgccatacttctgcttcgaagagcgatatggctgcgggcatc
accatgaagctgccttataccccgccttatgactgggcggcactgctggaatttctggcg
ggccgcgccatcccgggagtggaggccgtacagtctgggcagtctgggcagtattggcgt
tcctttcagttagaggggacacagggcctggtcgaagtccatcctgatccggcaaacgat
caacttctggcaaccatacacgcaacgaaaactcctcccataggcatcatcgtggcgcga
ttgcgccgcctgtttgatctagatacggagatcatcaggatcgaccagcatctttccaca
gacccgcttatggcttcacgcgtcagagcgcggcctggattgcgtgtcccaggcgcatgg
gatttgttcgaactcacggtgcgcgcgatattgggccagcaaattagcgtggctgcggcg
accacgctatcgggtcggcttgttgccgctcttgggggatcgctcacggaagaaatggcg
ctactgtcagacggcacgggaatctccaggatattcccgacacccgccgccgtcatggcc
gccgatctgggctctatcggcctaacccgggccagagaaaaggcgctgcagactctggct
gtggccatgcaagagggtcgcctggctttttcggctcataccctcgacagcatcatcaaa
aacctctgcgagctgccgggtatcggcccatggacggcgcactacatcgccatgcgtggc
tatcgtgacccggatgccttcccccattcagacttgggattgctgcgtgcgctggaaacg
gagagtgggcgccccagccccacagaaatgttgatgctcgccgaagcgtggcggccctgg
cgggcctatgcggccatgcgtttgtgggcgcagccctaa
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