Acidithiobacillus ferrivorans: Acife_1058
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Entry
Acife_1058 CDS
T01595
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
afi
Acidithiobacillus ferrivorans
Pathway
afi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Acife_1058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afi03019
]
Acife_1058
03009 Ribosome biogenesis [BR:
afi03009
]
Acife_1058
Messenger RNA biogenesis [BR:
afi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Acife_1058
Ribosome biogenesis [BR:
afi03009
]
Eukaryotic type
Pre-60S particles
RNases
Acife_1058
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
bAvd
Motif
Other DBs
NCBI-ProteinID:
AEM47226
UniProt:
G0JNS3
LinkDB
All DBs
Position
complement(1078950..1079522)
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AA seq
190 aa
AA seq
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MDPKAHRLIWIDLEMTGLQPEQDQILEIATLVTDNNLRILCEGPVLAVHQPEFALTAMDD
WNQRTHGASGLLQRVRDSRLDTAAVETQTLDFLHQHVTAGTSPICGNSVCQDRRFLARLM
PRLERFFHYRMMDVSTIKELATRWYPHLPKFPKAERHEALADIRESVSELAYYRERLFTQ
TSSLPNSEAE
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaaagcacaccgcctcatctggattgacctggagatgacaggcctgcaacca
gaacaggatcagattctggaaatcgccacgctggtcacggacaacaacctgcgaattctc
tgcgaaggtccggtattggccgtgcatcaaccggaattcgcactcacggctatggatgac
tggaaccagcgtacccatggcgcttccggtctcctgcaacgggtccgcgatagtcgcctg
gatacggccgcagtggaaacacaaacgctggacttcctgcaccagcatgtcacagcaggt
acctcaccgatctgcggcaacagcgtatgtcaggatcgccgctttttagcccgcctgatg
ccgcggctggaacgcttttttcactaccggatgatggatgtcagcaccatcaaggaactg
gccacgcgctggtatccacatctgcccaaattccccaaagccgagcgccacgaagcgctg
gccgatatccgcgaatccgttagtgagctcgcttactatcgcgagcggcttttcacgcag
acatcatcattgcccaactccgaggccgaatag
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