Acidithiobacillus ferrivorans: Acife_1333
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Entry
Acife_1333 CDS
T01595
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
afi
Acidithiobacillus ferrivorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
AEM47488
UniProt:
G0JQF7
LinkDB
All DBs
Position
1341065..1345618
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AA seq
1517 aa
AA seq
DB search
MPSSNKYLSDCTPDRPVTFNLAPAIRLIVCSQLMLPLLCFPWAATATPQFIGGGGTVTAG
AGNTSNAGIVVNASTLDIAAGSALGSGLLDLQNGALRTSGSMTIDNNIALAQGTPPATLT
SLCGGAYCFGVGDSMTLNTVGNTYVSTPSLLQQMQFPSNNKALGIWLTKGWQTNWMAGMQ
TSMQQGYAPVLFDYYLGDLGSMGSGAWGYVQQNAQAWLANTQLLANYLSTLSGTVSVVIQ
PEFNVPGVGNQAQFGAWLAQAAQILQHAQHPGLTILTSAGVGDFGVYSGSTENASQWSSF
YPSLSVAAPYLNFITFQEMRGATTGGTVVSPQQEGMSTIAGRVIAFSRYLQATYGKPLLL
GYMMMNPYTPAGTTANWSAIAAKAYAEILQVSPELQQQGVFGSLAMALFNDMNHSTINGV
DYFGTSSDYFGLVNSNGAPNTAGIGNGPYVLNADGQAWVNGTANAGTVQEVRSGGTIDTA
GNADTFKGTFSGNGGLFVVGGGSVTLTGNNTYAGNTYIEDSTLLQLGNGGSTGRILGNVL
NDGVLSFNQSGNVTFPGQISGLGIVWQQGPGTLYLTGSNSYTAGTLVTGGTLGVGAESAL
GSGNITLDGGTFETTSALQDSKAFFIGLNGGTLNTDGYTDTFAGNFIPMNSTADGGVTIT
GGGTALFTGEGSYTGGTTITPGTTLQIGNGANSQSGILGNVLDNGSIVFDVPEQVSFPGM
INGSGSVREEGSGTLALTGNNGYAGGTVVSNGGTLAIGAEPEMGSGSITLNNGTFLTTAA
LQDSRIFFIGQNGGTINNAGFINRFAGNFIPANGTSTGGLTISGGGTTILSGENTYSGGT
TINGYTSLQIGSGGMGGNLPGNVVDNGALAFNSAGNIVVPGTISGYGILWQQGPGLLTLT
GGNTYQSGTTIAGGTLGVDNVEALGAGVLTLDGGTFLTTQGLNLSLPVAVNSNGGVIDTD
GHIDTVNSRFSGSGPLTIVGGGSLILDNASNTVGHATVGGVSGFSTATTPTTLEVGDAAH
PGATLNSAVTVTSGGVLRGHGTVVGNVTNEGTVFPGGSIGTLHINGNYTQTAGGTLAIEV
APSAHDVLAVSGTADLAGKLLIQVDPGASYVAGDQYQILTAGGGVTGAFSTTVYDPFPAY
VTPSLATNENGLSIQLAATPGPVGMNDAPAYLGGQIYADIPTVLINMTAQADALVFAHDK
GSAGAVIARTMLDSMGTVMSGQLANLSVPGAQDQDAQNGRSPSGFWLQGLGDIGNATGSA
GISAFSDQSGGVYGGADFRHHGFTAGVAMGYVHTLLNLPTTGYADGSQANIGSISTTLYG
KYKHHHVFVQGLVGYTSESIQGMRNLPNTGATALGNYHGQMIHAVLQGGYAVQMPWVTVT
PNVGVASYSQSQPGFSEHGATSLLELNYAAQTDNESDAYAGVGVSHVYHIGDMTLIPHVD
FAVQRILTGNARVITEALGQLAPVSEVGIAPDRTSLTTDVGINLHIIRRLSLYTEYLGNY
AGNISTTGLALGGVWRW
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaagcaacaaatacctgtccgactgcacacccgatcggcccgtaacctttaat
ctggcacccgccatacggttaatcgtatgtagtcagctgatgttgccattgttgtgtttc
ccatgggctgccacggccacgcctcagttcatcggtggtggtggtacggtcacggctggc
gcaggcaacaccagtaatgccgggatcgtggttaacgcctccaccctggatatcgccgct
ggctctgctctgggtagcgggttgctcgacctccaaaatggggcgctacggacttccggc
agcatgacgatagataacaacattgcgctggctcagggtactccacccgccaccttgact
tctctttgcgggggcgcctactgctttggggtcggcgacagcatgacgttgaatacggtc
ggtaacacctacgtgagtacgccttccctcctgcaacaaatgcaattccccagcaacaac
aaggcgctcggtatatggcttaccaaaggctggcagaccaactggatggcaggcatgcaa
acgtcgatgcaacagggttatgctcccgttctgtttgattattacctgggtgacctgggc
tccatgggttctggtgcctggggttatgtgcagcaaaatgcacaagcgtggctggcaaac
acccaactgctcgctaattatctgtccacgctgagcggtaccgtgtccgtagtgattcaa
cctgagttcaatgtcccgggggtaggtaatcaggcacaattcggggcatggctcgcccag
gctgcacagattcttcaacatgcccagcatcctggcctgactattctcaccagtgctggc
gtcggagacttcggtgtctatagtggtagtaccgaaaacgcgtcccaatggtccagcttt
tacccgtccctgagcgtcgccgcgccgtacctgaacttcatcacttttcaggaaatgcgc
ggcgcaactaccggtggaacggtggtcagcccccagcaggagggtatgagcaccatagct
ggtagggttatcgccttttcccgctatctgcaagcgacctatggcaaaccgttacttctc
gggtacatgatgatgaatccgtacacgccagcagggactaccgcaaactggtcggcgatt
gccgccaaagcctatgccgaaatcttgcaggtttcccctgagttacagcagcagggcgtc
tttggcagcctcgctatggcactcttcaacgacatgaatcactcaacgatcaatggcgtc
gattactttggcacttcttcagactacttcggattggtgaacagcaacggtgctccgaac
actgccgggattggcaatggaccctatgtgctcaacgcggacgggcaggcatgggtcaac
ggtacggcgaacgctggcaccgtacaagaggtccgcagtggtggaaccattgatacggca
ggaaatgccgatacattcaagggcacgttttcaggtaatggggggttattcgtggtaggg
gggggcagtgtgacgctgaccgggaacaacacctatgccggaaacacctatattgaagac
tccaccctattacagttgggcaatggtggtagcactggccgtattcttggcaacgtcctc
aatgacggcgttttgtcattcaatcagtctggcaacgtcacctttccgggtcagatcagc
ggcctgggcatcgtatggcaacaggggccgggcactttatatttgacaggcagcaacagt
tataccgctggcaccctggttacgggtggcaccttgggcgtgggggcggagagtgcgctg
ggcagcggcaatatcaccttggatggtggcacttttgaaacgacatcggcgttacaggat
agtaaagccttcttcatcggcctcaacggcggcactctgaatacggatggttatacggat
accttcgccggcaatttcataccaatgaatagcaccgccgatggcggtgtcaccatcacc
gggggcggcacggcgttatttaccggggagggcagttatacagggggtaccacgatcacg
ccgggcaccacgctccagattggtaatggcgctaatagtcagagtggcattctgggcaat
gttctggataacggttccattgtttttgacgtgcctgaacaggtgtctttcccgggtatg
attaacggatcaggcagcgtccgtgaagaaggctctggaaccttggccctcactggtaac
aatggttacgctggtggcactgttgtcagcaatggcggcacgctggctattggtgctgag
cctgaaatggggagtggtagcatcacccttaataacgggacattcctgaccacggcagca
ttacaagatagtcgcattttttttatcggacaaaatggtggaacgatcaataatgccggc
ttcatcaaccgttttgccggaaattttattcccgcaaatggcacttcaaccggtggcctg
acaatctccggaggcggtaccaccatcctttccggagagaacacgtattccggaggcacc
acgattaatggctatacgagtcttcagattggcagcgggggcatgggtggaaatcttccg
ggcaatgtcgtcgataatggcgcactggcgtttaatagcgccggaaacatcgtggtgcca
ggtaccatcagtgggtatggcatactctggcaacaggggccaggcctgcttacattaact
ggcggcaacacctatcaaagcggcaccacgattgcgggtggcaccctcggtgtcgataat
gtcgaggccttgggtgctggcgtgctcacgctggatggcggcacattcctcaccacgcaa
ggcttgaacctgtctttgcccgtcgcggtgaatagcaatgggggtgttatcgacacggac
ggccatattgacacggtaaacagccgcttttccgggagcggtccactgacgatagtcggt
ggcggatcgctgatcctggataacgcctccaatacggtggggcacgcaacggtcggtggt
gtgtctgggttttccaccgccacgacaccgaccacactggaagtcggtgatgcagcacac
cctggggctaccctgaatagcgctgtaaccgtgacttcagggggcgttttacgcggccat
ggcacggtcgtgggtaatgtcaccaatgagggtacagtattccccggtggcagcattggc
accctgcatatcaacggcaactacacacagacggctggtggtacgctggctattgaggtt
gccccttcggcgcatgatgtgctggccgtttccggcaccgccgacctggccggaaaattg
ctgatacaagtggatcctggcgccagttatgtggccggggatcagtaccagatactgact
gcgggagggggggttacaggagcattctcgacaactgtttatgatccatttccggcctat
gttacccccagtctggcgaccaatgaaaacgggctcagcatccaattggctgccactcct
gggccagtgggcatgaatgacgctccggcgtatctcggcgggcagatttacgcagatatt
cctaccgtattaatcaacatgacggcgcaggcggatgcactggtatttgcgcatgataaa
ggttccgcaggtgcagtgatcgcgcgcaccatgctggattccatggggaccgtcatgtca
ggacaattggccaatttatccgtccccggcgcgcaggatcaggatgcgcagaatggcagg
tcaccatccggattctggttacagggattaggagacatcggtaatgccactggatctgcc
ggaatatctgcgttctccgatcaaagcggtggtgtctatggcggcgccgatttccggcac
cacggctttacggcaggggtggccatgggttacgtacataccttactgaacctgccaacg
acaggctatgcggatggtagccaagcgaacatcggaagcataagcacgacactctatggc
aaatataagcatcatcacgtatttgtgcagggactggtggggtacaccagcgaatccatc
caggggatgcgtaaccttccgaatacgggcgctacagccttaggcaattatcatgggcag
atgatacacgctgtgctgcagggtggatatgctgtgcagatgccctgggtgacggtgacc
cctaatgttggcgtggcaagctattcacagtcacaaccgggattttcggagcatggggct
acatcactcctcgaattaaattacgccgcccagacggataacgaaagcgatgcctatgcg
ggagtcggggtaagccatgtttaccatatcggtgatatgaccttaatcccccatgttgat
ttcgcagtccaacgcatcttaaccggtaatgcgcgtgttatcacggaagcattagggcag
ttggccccggtgtcggaggtgggtatagctccggaccggacatcgcttactactgatgtg
ggcattaatctgcatattatccgtagattatctttgtacaccgagtatctgggaaactat
gccggcaacatctcaaccactggactcgcgctgggtggagtctggcgctggtga
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