Acidithiobacillus ferrivorans: Acife_1387
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Entry
Acife_1387 CDS
T01595
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
afi
Acidithiobacillus ferrivorans
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afi03032
]
Acife_1387
03400 DNA repair and recombination proteins [BR:
afi03400
]
Acife_1387
Enzymes [BR:
afi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Acife_1387
DNA replication proteins [BR:
afi03032
]
Prokaryotic type
DNA Topoisomerases
Acife_1387
DNA repair and recombination proteins [BR:
afi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Acife_1387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AEM47537
UniProt:
G0JR04
LinkDB
All DBs
Position
1393171..1395708
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AA seq
845 aa
AA seq
DB search
MIAFAKETIPVSLEKEMRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHEMNNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTMVRMAQDFSMRYPLIDGQGNFGSVDGDSPAAM
RYTEVRMSRIAHEMLADLEKETVDFGPNYDEKEWEPLVMPARIPNLLINGSAGIAVGMAT
NIPPHNLTEVISACLALVDDPETSDEDLFTLVPAPDFPTAGFIHGRAGSIEAYRTGRGRV
VMRARCEFETDKKTNRQSIIVSELPYQVNKARLIERIAEMVKEKRLEGISDLRDESDKSG
MRIAIELKRDANADVVLNNLYQHTVMQSVFNINMVALLDGAPRTLGLRDLLQAFIQHRRE
VVTRRTVFELKKARDRAHILEGLAVALVNLDPLISLIRAAANPAEAKAQMLAKSWEPGMV
AALLVERAEPSEGMQADGYHLSETQAQAILDLRLHRLTGLEQDKIRDEYLALLDRIRELL
EILGSKTRLMEVIREELVAIRDQYGDARRSEIVADTGDISTEDLITEEEMVVTFTHAGYI
KAQPVTVFNAQRRGGKGKMATTTKEEDFVERMFCASTHAYCLFFSNLGKVFWQKVYQLPQ
AGRGAKGKPIVNMLSLAPTERITAVLPVRDFTEGQFVCMVTSHGVVKKTPVMEYSRPRSQ
GINAINLDPGDRLVAVGLSDGQREFMLFTRHGMAVRFPEAKARAMGRNARGVRGISLEEN
DRVISAQWVDSSQVILTTTANGYGKLTEVDEYRRTNRGGKGVIAIQTNARNGDVVGALAV
TERDELMLVSDHGTLIRIAINSIRRTGRNAQGVRLINLGEGEQLAGLALIADTEEEEGEQ
TDLPQ
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcattcgctaaagaaactattcctgtcagtctcgaaaaggagatgcgccagtcc
tacctcgattacgccatgagcgtgatcgtcggccgcgcccttcccgacgcccgcgatggc
ctcaagccagtgcatcgtcgtgtgctcttcgccatgcacgaaatgaacaacgactggaat
aagccctataagaagtcggcgcgtgtcgtcggtgatgtcatcggtaaataccatccccat
ggcgataccgcggtttatgacacgatggtgcggatggcgcaggacttttccatgcgctac
ccgctcatcgacgggcagggtaactttggttcggtggatggcgacagccccgccgccatg
cgttacaccgaagtgcgcatgtcccgcatcgctcacgaaatgctggcggatctggagaag
gaaaccgtcgattttggtcccaactacgatgaaaaggagtgggagccgctggtcatgccg
gcacgtattcccaacctgctgatcaatggttcggcgggcatcgctgtgggtatggccacc
aatattccaccccacaatctgacggaagtgatcagtgcctgtctggcgctggtggatgat
cccgagacttcggatgaagatttgttcaccctggtcccggcgccggatttcccgacggca
ggctttattcatggccgcgccggtagtatcgaagcctaccgcaccgggcggggccgggtg
gtcatgcgtgcgcgctgcgagttcgagacggacaagaaaaccaatcggcagagcatcatt
gtctccgagctgccctatcaggtaaacaaggccagactcattgagcgcatcgccgagatg
gtcaaggaaaagcgtctggaaggcatcagtgatctgcgcgacgagtccgataaatcgggc
atgcgtatcgccattgaactcaaacgcgatgccaatgccgatgtggtgctaaataatctc
taccagcacacggttatgcagagcgtgttcaatatcaacatggtggcgctgctggacgga
gcaccgcgaacccttggtctgcgcgatctgctgcaggccttcatccagcatcgccgcgaa
gtggttacccggcgtaccgtctttgaactgaagaaggcacgcgaccgtgcccatatcctc
gaaggtctggcagtggcgctggtcaatctggatccgctcatcagcctgattcgggcagcc
gccaacccggcggaagccaaggcgcagatgctggcgaaatcctgggagccgggcatggtc
gcggcgctgttggtcgagcgtgctgagccttctgagggtatgcaggccgatggctatcat
ctgtccgagacccaggcccaggctattctcgatctgcgtttgcaccgtctgaccgggctg
gagcaggacaaaatccgcgatgaatacctggccttgttggatcgcatccgtgagttgctg
gagattctcggctcaaagacccggctgatggaggtcatccgcgaagagttggtggctatc
cgcgatcagtacggagatgcccggcgcagtgagattgtggcggacaccggtgatatttcg
acggaagatctgattaccgaagaggaaatggtggtgaccttcacccacgccggttatatc
aaggcgcagccggtgacggtcttcaatgcccagagacggggcggcaaaggcaagatggcc
accaccaccaaagaagaagactttgtcgaacgcatgttctgcgcttcgacccatgcctat
tgtctattcttcagcaatctcggtaaggttttctggcagaaggtatatcagttaccgcag
gcgggtcgcggtgccaagggcaagcccatcgtcaacatgctgtccctggcacccacggag
cgtatcaccgccgtgttgccggttcgagactttaccgaggggcagtttgtttgcatggtg
acctcccacggtgtcgtcaaaaagacgccggtcatggagtattcccgcccgcgcagtcag
ggtatcaatgccatcaacctcgaccccggcgatcgtctggtcgccgttggcctttccgac
gggcagcgcgagttcatgctctttacccggcatggtatggcggtgcgtttccccgaggcg
aaagcccgggccatggggcgtaatgcccggggcgtgcgcggcatcagtctggaagagaat
gatcgggtgatctcggcacagtgggtggactccagtcaggtgatcctcaccactacggcc
aatggttacggtaaattgacggaagtggatgaataccgccgtaccaaccggggtggaaaa
ggtgttattgccatccagaccaacgcgcgcaatggtgatgtggtcggcgcgctggcggta
acggagcgggacgaactgatgctggtctccgatcacggcaccctgattcgtattgccatc
aacagcatccgtcgtaccggccggaatgcgcagggggtgcgcctgattaacctgggcgag
ggtgagcaactggcgggactggcgttgattgccgatacggaagaagaggagggggagcag
actgatctgccccagtaa
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