Acidithiobacillus ferrivorans: Acife_1396
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Entry
Acife_1396 CDS
T01595
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
afi
Acidithiobacillus ferrivorans
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afi03032
]
Acife_1396
03036 Chromosome and associated proteins [BR:
afi03036
]
Acife_1396
03400 DNA repair and recombination proteins [BR:
afi03400
]
Acife_1396
DNA replication proteins [BR:
afi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Acife_1396
Chromosome and associated proteins [BR:
afi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Acife_1396
DNA repair and recombination proteins [BR:
afi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Acife_1396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AEM47546
UniProt:
G0JR13
LinkDB
All DBs
Position
1404821..1405126
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AA seq
101 aa
AA seq
DB search
MTKSELIKNISAQYPHLSVRDIEMATRQVLDYLSDALAEGERIEIRGFGSFSMHVRPAKQ
GRNPKTGEPVLVPEKRVPHFKPGKELREQVDYPEVVAGGKV
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatcagaattgatcaaaaatatcagtgcacaatatccgcatctgagtgtgcgt
gatattgaaatggctacccgccaggtgctcgattatctgagcgatgcattggctgagggt
gaacgcattgaaattcgtggttttggaagtttttccatgcacgtgcgtcctgccaagcag
gggcgtaatccgaaaacgggagagccggtgctggtgcccgaaaaacgggttccgcatttc
aaaccaggtaaggaactccgtgagcaggttgattatcctgaagtggttgcgggtggcaag
gtctaa
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