Acidithiobacillus ferrivorans: Acife_1501
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Entry
Acife_1501 CDS
T01595
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
afi
Acidithiobacillus ferrivorans
Pathway
afi03030
DNA replication
afi03430
Mismatch repair
afi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Acife_1501
03430 Mismatch repair
Acife_1501
03440 Homologous recombination
Acife_1501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afi03032
]
Acife_1501
03400 DNA repair and recombination proteins [BR:
afi03400
]
Acife_1501
Enzymes [BR:
afi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Acife_1501
DNA replication proteins [BR:
afi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Acife_1501
DNA repair and recombination proteins [BR:
afi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Acife_1501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_16
AAA_30
AAA_5
AAA_22
AAA_19
AAA_14
AAA_18
AAA_2
TIP49
TsaE
nSTAND3
PIF1
AAA_assoc_2
Mg_chelatase
AAA_28
RCF1-5-like_lid
AAA_24
PreAtp-grasp
DNA_pol3_tau_5
SKI
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AEM47643
UniProt:
G0JRQ0
LinkDB
All DBs
Position
1507075..1508763
Genome browser
AA seq
562 aa
AA seq
DB search
MSAYLALARRWRPQHFDDFVGQEAVVAALRHALDSGRIHHAFLFTGTRGVGKTTLARLLA
KCLNCERGVSSNPCGACSACRGIAAGNFVDLQEVDAASRTRVDETRDLMDNVQYAPTVGR
YKVYLIDEVHMLSTHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLRRLD
IPQIQGRLQQIMAAEQIPAEDAALQILSRAADGSLRDALSLLDQAIVHGGGAVQREGVLA
MLGRSSDDAVLGMVEALVDRDATQVFAILDDHLARGMDGAGLLDLVIEGVHRLSLAQFLP
VDSARDDADLIARLRGRVSPLTLQSWYFLLLSARRDFALYPDSRMALEMAVLRVLSFSGA
ASPGLPPAVLPGPGTAHVVESSAPKAEVTSPASHLSAPSLSYHSRDAVREAPPLATPDRV
AETAPSTDWRCVVEALAVSPMLAEYLRYGQALRCDSEAVELAVEPNYLPFLVKAEARRAL
HQALTAYFGREPRLSIVPLTKAAGVGSLAQEEKARAASRQAEAVARVTADPRIGAFLEVL
EAHVESIEIMVPAANGGAVSSQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctacctcgcgcttgcccgccgctggcggccacaacactttgacgattttgta
gggcaagaggctgtggtcgctgccttgcgccacgccctggattccggtcgcattcatcat
gcttttctgttcaccgggacgcggggagtcggtaaaacgacgctggcgcggctgctggcc
aaatgcctgaactgtgagcggggcgtgagcagcaatccttgcggagcgtgtagtgcctgt
cgtggcattgccgcgggaaattttgttgatctgcaggaggtggacgcggcgagccgcacc
cgggtggatgaaacccgcgacctgatggacaacgtgcagtacgcgccgacggtgggccgc
tacaaagtgtaccttatcgacgaggtacacatgttgtccacgcacagcttcaatgcactg
ctgaagaccctcgaagaaccgccggagcatgtcaagtttctgctggcgactacggatccg
cagaaactgccggtaaccgtactctcccgctgtctacagtttaatttgcggcggctggat
attccacaaattcagggacgattgcagcagatcatggcggccgaacagatacccgccgag
gatgccgcactgcagatattgtcacgcgctgccgatgggagcctgcgcgacgccctgagt
ttgctggatcaagctattgttcatggtggtggcgcggttcagcgtgagggtgtgctcgcg
atgcttgggcgcagcagtgacgatgccgtgttgggcatggtcgaagcattggtggatcgg
gatgctacgcaggtatttgccatactggatgatcatttggcgcggggtatggatggcgcc
ggcctactcgatttggtcatagagggcgtgcatcgtctcagcctggcacaatttcttccg
gtggattcggcgcgcgatgatgcagatctgatcgcgcgcctgcgtgggcgtgtcagcccg
cttaccttgcagtcctggtattttttgctcctctcggcacgccgtgactttgcgctttat
ccggacagtcgcatggcactggaaatggctgttctgcgggtattgagcttttccggagcg
gcatcgccaggcttgccgcccgcggtgcttccgggtccgggtactgcgcatgtcgttgag
tcatcagcgccgaaagcagaggtaacttcaccggcatcgcacctgtctgcaccatcgctt
tcctaccattcgcgggacgcggttcgggaagcaccgccgctagcgacgccggatagggtg
gctgagacggcgccctcgacggactggcgttgtgtggtggaggcgctggcggtttcgccc
atgcttgccgagtacctgcgctatggacaggcattgcgctgcgattcggaagcggtggaa
ttagccgtggagcccaattatttgccattcctcgtcaaggccgaggcccgcagggcgtta
catcaggcgcttactgcgtattttggccgggagccgcgtctgagcatcgtaccccttacc
aaagcggccggggtggggagcctggcgcaggaagagaaagcgcgcgcggcatcccggcag
gccgaggccgtggcacgcgtcactgcggatccccgcataggcgcattcctggaagtcttg
gaggcccatgtggaatccattgaaattatggtgcccgctgcgaacggcggtgccgtcagc
tcacagtga
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