Acidithiobacillus ferrivorans: Acife_2054
Help
Entry
Acife_2054 CDS
T01595
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
afi
Acidithiobacillus ferrivorans
Pathway
afi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Acife_2054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afi03400
]
Acife_2054
DNA repair and recombination proteins [BR:
afi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Acife_2054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
FbpC_C_terminal
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEM48174
UniProt:
G0JMC4
LinkDB
All DBs
Position
2034206..2036746
Genome browser
AA seq
846 aa
AA seq
DB search
MTDPTPLQNHTPMMRQYFGLKEECPDALLFYRMGDFYELFFEDAEKAARLLGITLTSRGQ
SAGQAIPMAGVPVQSVDGYLAKLVRLGERVAIGEQIGEATTAKGPVERAIVRVITPGTII
DSALLDAGQEPLLLALCPDGQRCGLAWLDAAGGRLMVREVANTAIADAIARRPVAEIIAP
EDTPLPVGVDPQKLQLLEKTGFQTRRTEAVLERYFGERLASFGCNDWPLALRAAAALLNY
AEAQLRSSLTQVQRIHPERTEDELYLDATALRALEVVESLQGNGPTLFSLLQKTQTAMGA
RLLRRWLLRPLRQGPVLASRQEVVAALTQGSGPVAIQKALHGIADAERILTRIAVKSASP
RDFAQLRSTLQALPTLRATLEETGHPALAPYQERIALFAALRTLLEESLVDAPPMTQRDG
GYIRAGYDAELDRLQQLSQNLQEVLRDLEQQERQRTGITQLKIQFNRVHGFYIEISRSYQ
GPIPDDYRRRQTTKNAERYINDALKVIEDQALSAESLALSRERLLFTQVLEAAVPEVPTL
QDAMTAVAELDGLSTLAERAITLHWCAPQFVREPLLHIRDGRHPVVEAQIGSNFVPNDLN
FDKEQRMLLITGPNMGGKSTYMRQTALIVLLAHIGSWVPAREAIIGPIDQIFTRIGAADD
LAGGRSTFMVEMSETARILHLATAQSLVILDEIGRGTATYDGLSIAWATAEALVERGACT
LFATHYFELTELDLPGLRNAHLDALTQGDQVVFLHRVESGPATQSYGLAVAKLAGIPDPV
VRRARQRLSQLEETAQQPTRNTAPAQLPLFQAAPHPAVQRLSQLEPDQLSPRQALDLLYT
LKELAQ
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctactcctctgcaaaaccacaccccgatgatgcgtcagtatttcgggctg
aaggaagaatgcccggatgcgctgcttttctatcgcatgggggatttttacgagctattt
tttgaagacgccgaaaaagccgcccgcctcctcggcatcaccctcaccagccgcggacaa
agcgccggacaggccattcccatggcgggggtacctgtccaaagtgtagatggctatctc
gcgaaactggtgcgtctgggcgaacgggtggccattggcgagcaaattggcgaagcgacc
accgcgaaaggtcccgtggaacgcgccatcgtgcgggttatcacccccggtaccatcatt
gacagtgccttattggatgccgggcaggagcctctgctcctggccctctgcccggacggc
cagcgttgtggcctggcctggctggatgccgccggagggcgcctcatggtgcgtgaggtg
gccaacaccgccatcgcagatgccatagcgcggcgtcctgtcgcagaaatcatcgccccg
gaagatacgccgcttccggtcggagtcgacccgcaaaaattgcaactcctggagaaaacc
ggttttcaaacacggcgcaccgaggcagtacttgaacgctattttggggaacgactggcg
agtttcgggtgcaacgactggcccctcgccctacgcgccgctgccgcactcctcaattat
gccgaggcccaactacgcagcagcctgacccaagtccagcgaattcatccggagcgcact
gaagatgagctctatctggatgcgaccgccttgcgggcactggaagtggtggaaagcctg
caagggaatggtcccactttgttcagcttgttgcaaaaaacccagacggctatgggcgcc
cgcttgctccgtcgctggctgctacgaccactacgccagggacccgtgcttgcgagccgc
caggaagtcgtcgcagcgcttacccaaggcagcggaccagtcgccatccagaaggccttg
cacggtattgcggatgcggagcgcattctcacccgcatcgccgtaaaaagtgcgagcccc
cgcgatttcgcccaactccgcagcaccttgcaggcgctgcccacgctacgcgccaccctc
gaagaaacagggcatccggcattggctccttatcaggagcgcatagcgctctttgccgcc
ctccgcacgctgctggaagagtccttagtggatgccccgcccatgacccagcgggacggt
ggttacatacgtgccggctacgatgccgaattggatcggcttcaacaacttagtcagaat
ttgcaggaagtactgcgtgatctggagcagcaggagcgccagcgtaccggcatcacccaa
ctcaaaatccagttcaaccgggtgcatggcttttacatcgagatcagccgcagctatcaa
gggcccattcctgacgactatcgccgtcgccagaccaccaaaaacgcggaacgctacatc
aacgatgccctgaaagtcattgaagatcaggccctctcggcagagagcctggccctgagc
cgggagcgcctgctcttcacgcaggtcctggaagcggcagtccccgaagtgccgaccctg
caagatgccatgaccgccgttgccgaactggacggtctcagcacgctggccgaacgcgcc
atcaccctgcactggtgtgccccgcagttcgtcagagaaccgcttttacacatccgtgac
ggtcgtcatcccgtcgtagaagcccagatcggcagtaatttcgtgcccaacgatctcaat
tttgataaagaacagcggatgctgcttatcaccggtcccaatatgggcggcaaatccacc
tacatgcggcaaacagcgctcatcgtcctgctcgcccacatcggcagctgggtgcctgcc
cgcgaagccatcattggccccatcgaccagattttcacccgcatcggcgctgccgacgat
ctggccggcggtcgctccaccttcatggtggaaatgagtgaaacagcgcgcatcctccat
ctcgctacggcccaaagcctggtgattctggatgaaatcggacggggcaccgccacttat
gacggtctctccatcgcctgggccacggccgaggcgctagtggaacggggcgcctgcacg
ctcttcgccacccactattttgaactgacggagctggatcttcccggcctgcgtaacgct
catctcgacgctttgacacaaggggatcaggtcgtattcctgcatcgggtggagagtggt
ccggccacgcagagctacggactggcggttgccaagcttgccgggattccggatccagtc
gtgcggcgcgcccgccagcgactcagtcaactggaagaaaccgcccaacagccgacccgc
aatacagcgcccgcccagttgcctctcttccaggccgctccgcatccggcggtgcagcgg
ttaagtcagctggaaccagaccaactcagccccaggcaggccctggatctgctctataca
ctcaaagagttggcgcaataa
DBGET
integrated database retrieval system
